Query: NC_009488:1871912 Orientia tsutsugamushi str. Boryong, complete genome
Start: 1871912, End: 1901214, Length: 29303
Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria
General Information: This strain was isolated from a human in 1995 in Boryong, Korea. Causal agent of scrub typhus. This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010793:794494* | 794494 | 814226 | 19733 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 10700 | BLASTN svg | BLASTP svg |
NC_010793:1811401* | 1811401 | 1871543 | 60143 | Orientia tsutsugamushi str. Ikeda, complete genome | 0 | 791 | BLASTN svg | BLASTP svg |
NC_010793:1075388* | 1075388 | 1103743 | 28356 | Orientia tsutsugamushi str. Ikeda, complete genome | 3e-167 | 597 | BLASTN svg | BLASTP svg |
NC_010793:721944 | 721944 | 745827 | 23884 | Orientia tsutsugamushi str. Ikeda, complete genome | 1e-110 | 408 | BLASTN svg | BLASTP svg |
NC_010793:541040 | 541040 | 574148 | 33109 | Orientia tsutsugamushi str. Ikeda, complete genome | 6e-88 | 333 | BLASTN svg | BLASTP svg |
NC_010793:81219* | 81219 | 104392 | 23174 | Orientia tsutsugamushi str. Ikeda, complete genome | 4e-64 | 254 | BLASTN svg | BLASTP svg |
NC_010793:668500 | 668500 | 686099 | 17600 | Orientia tsutsugamushi str. Ikeda, complete genome | 4e-49 | 204 | BLASTN svg | BLASTP svg |
NC_000963:110500* | 110500 | 134099 | 23600 | Rickettsia prowazekii str. Madrid E, complete genome | 8e-32 | 147 | BLASTN svg | BLASTP svg |
NC_006831:849500 | 849500 | 888827 | 39328 | Ehrlichia ruminantium str. Gardel, complete genome | 8e-32 | 147 | BLASTN svg | BLASTP svg |
NC_006832:853500 | 853500 | 893221 | 39722 | Ehrlichia ruminantium str. Welgevonden, complete genome | 8e-32 | 147 | BLASTN svg | BLASTP svg |
NC_005295:873500 | 873500 | 913939 | 40440 | Ehrlichia ruminantium str. Welgevonden, complete genome | 8e-32 | 147 | BLASTN svg | BLASTP svg |
NC_006142:33268* | 33268 | 54178 | 20911 | Rickettsia typhi str. Wilmington, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_006142:57571* | 57571 | 80599 | 23029 | Rickettsia typhi str. Wilmington, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_009882:100000* | 100000 | 122099 | 22100 | Rickettsia rickettsii str. 'Sheila Smith', complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_010263:100000* | 100000 | 122099 | 22100 | Rickettsia rickettsii str. Iowa, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_012633:98000* | 98000 | 120099 | 22100 | Rickettsia africae ESF-5, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_009879:107890* | 107890 | 125743 | 17854 | Rickettsia canadensis str. McKiel, complete genome | 7e-23 | 117 | BLASTN svg | BLASTP svg |
NC_009881:92929* | 92929 | 119903 | 26975 | Rickettsia akari str. Hartford, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_007354:756500 | 756500 | 781599 | 25100 | Ehrlichia canis str. Jake, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_010793:30488* | 30488 | 50392 | 19905 | Orientia tsutsugamushi str. Ikeda, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
NC_000963:83408* | 83408 | 106099 | 22692 | Rickettsia prowazekii str. Madrid E, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_020411:278000* | 278000 | 301031 | 23032 | Hydrogenobaculum sp. HO, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015587:278000* | 278000 | 301035 | 23036 | Hydrogenobaculum sp. SHO chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015557:278000* | 278000 | 300999 | 23000 | Hydrogenobaculum sp. 3684 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009883:871594* | 871594 | 893861 | 22268 | Rickettsia bellii OSU 85-389, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007940:782207* | 782207 | 801705 | 19499 | Rickettsia bellii RML369-C, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008513:343540* | 343540 | 365176 | 21637 | Buchnera aphidicola str. Cc (Cinara cedri), complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |