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Query: NC_009488:1871912 Orientia tsutsugamushi str. Boryong, complete genome

Start: 1871912, End: 1901214, Length: 29303

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a human in 1995 in Boryong, Korea. Causal agent of scrub typhus. This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010793:794494*79449481422619733Orientia tsutsugamushi str. Ikeda, complete genome010700BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome0791BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome3e-167597BLASTN svgBLASTP svg
NC_010793:72194472194474582723884Orientia tsutsugamushi str. Ikeda, complete genome1e-110408BLASTN svgBLASTP svg
NC_010793:54104054104057414833109Orientia tsutsugamushi str. Ikeda, complete genome6e-88333BLASTN svgBLASTP svg
NC_010793:81219*8121910439223174Orientia tsutsugamushi str. Ikeda, complete genome4e-64254BLASTN svgBLASTP svg
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome4e-49204BLASTN svgBLASTP svg
NC_000963:110500*11050013409923600Rickettsia prowazekii str. Madrid E, complete genome8e-32147BLASTN svgBLASTP svg
NC_006831:84950084950088882739328Ehrlichia ruminantium str. Gardel, complete genome8e-32147BLASTN svgBLASTP svg
NC_006832:85350085350089322139722Ehrlichia ruminantium str. Welgevonden, complete genome8e-32147BLASTN svgBLASTP svg
NC_005295:87350087350091393940440Ehrlichia ruminantium str. Welgevonden, complete genome8e-32147BLASTN svgBLASTP svg
NC_006142:33268*332685417820911Rickettsia typhi str. Wilmington, complete genome4e-27131BLASTN svgBLASTP svg
NC_006142:57571*575718059923029Rickettsia typhi str. Wilmington, complete genome2e-26129BLASTN svgBLASTP svg
NC_009882:100000*10000012209922100Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-26129BLASTN svgBLASTP svg
NC_010263:100000*10000012209922100Rickettsia rickettsii str. Iowa, complete genome2e-26129BLASTN svgBLASTP svg
NC_012633:98000*9800012009922100Rickettsia africae ESF-5, complete genome2e-26129BLASTN svgBLASTP svg
NC_009879:107890*10789012574317854Rickettsia canadensis str. McKiel, complete genome7e-23117BLASTN svgBLASTP svg
NC_009881:92929*9292911990326975Rickettsia akari str. Hartford, complete genome1e-21113BLASTN svgBLASTP svg
NC_007354:75650075650078159925100Ehrlichia canis str. Jake, complete genome1e-21113BLASTN svgBLASTP svg
NC_010793:30488*304885039219905Orientia tsutsugamushi str. Ikeda, complete genome4e-18101BLASTN svgBLASTP svg
NC_000963:83408*8340810609922692Rickettsia prowazekii str. Madrid E, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_020411:278000*27800030103123032Hydrogenobaculum sp. HO, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015587:278000*27800030103523036Hydrogenobaculum sp. SHO chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015557:278000*27800030099923000Hydrogenobaculum sp. 3684 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009883:871594*87159489386122268Rickettsia bellii OSU 85-389, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007940:782207*78220780170519499Rickettsia bellii RML369-C, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008513:343540*34354036517621637Buchnera aphidicola str. Cc (Cinara cedri), complete genome3e-0661.9BLASTN svgBLASTP svg