Pre_GI: BLASTN Hits

Some Help

Query: NC_008595:2687245 Mycobacterium avium 104, complete genome

Start: 2687245, End: 2728149, Length: 40905

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome05019BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome02920BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome02920BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome02918BLASTN svgBLASTP svg
NC_008595:19114911911491193399222502Mycobacterium avium 104, complete genome02918BLASTN svgBLASTP svg
NC_008595:52344675234467525314218676Mycobacterium avium 104, complete genome02670BLASTN svgBLASTP svg
NC_008595:66150766150768418722681Mycobacterium avium 104, complete genome02648BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome02415BLASTN svgBLASTP svg
NC_008595:19518871951887197059018704Mycobacterium avium 104, complete genome01546BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome01538BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome01534BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome01534BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome1e-173618BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome4e-173617BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome3e-161577BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome3e-161577BLASTN svgBLASTP svg
NC_008595:51689415168941521359944659Mycobacterium avium 104, complete genome1e-160575BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome5e-160573BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome5e-160573BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome1e-120442BLASTN svgBLASTP svg
NC_008595:18692841869284189175722474Mycobacterium avium 104, complete genome2e-119438BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome9e-91343BLASTN svgBLASTP svg
NC_013441:28421342842134286273320600Gordonia bronchialis DSM 43247, complete genome4e-68268BLASTN svgBLASTP svg
NC_013235:13259751325975134970523731Nakamurella multipartita DSM 44233, complete genome8e-51210BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-48202BLASTN svgBLASTP svg
NC_015312:3675148*3675148374606470917Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_015312:2278566*2278566232680848243Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome8e-42180BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome2e-39172BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome2e-39172BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome2e-39172BLASTN svgBLASTP svg
NC_014814:43265004326500435109924600Mycobacterium sp. Spyr1 chromosome, complete genome7e-39170BLASTN svgBLASTP svg
NC_008596:2873675*2873675289516021486Mycobacterium smegmatis str. MC2 155, complete genome3e-32149BLASTN svgBLASTP svg
NC_012522:77634267763426778680123376Rhodococcus opacus B4, complete genome4e-28135BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome6e-27131BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete2e-26129BLASTN svgBLASTP svg
NC_008278:29723232972323301617343851Frankia alni ACN14a, complete genome9e-23117BLASTN svgBLASTP svg
NC_009142:39438293943829396903925211Saccharopolyspora erythraea NRRL 2338, complete genome4e-22115BLASTN svgBLASTP svg
NC_014215:22592902259290228320523916Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,9e-1797.6BLASTN svgBLASTP svg
NC_014215:14250014250016776025261Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,9e-1797.6BLASTN svgBLASTP svg
NC_009921:26057212605721262856122841Frankia sp. EAN1pec, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014165:20819142081914210211520202Thermobispora bispora DSM 43833 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010002:48901924890192491000619815Delftia acidovorans SPH-1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015312:55790785579078560145622379Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015563:26566282656628268487728250Delftia sp. Cs1-4 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013510:3032114*3032114305663624523Thermomonospora curvata DSM 43183, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015312:67179736717973673763819666Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014318:61086336108633613113322501Amycolatopsis mediterranei U32 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009142:55192085519208554891729710Saccharopolyspora erythraea NRRL 2338, complete genome5e-0661.9BLASTN svgBLASTP svg