Pre_GI: BLASTN Hits

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Query: NC_008543:127675 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 127675, End: 153118, Length: 25444

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence039300BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence08800BLASTN svgBLASTP svg
NC_008060:3155133*3155133320509949967Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence04922BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome04242BLASTN svgBLASTP svg
NC_012724:359444*35944438978130338Burkholderia glumae BGR1 chromosome 1, complete genome04238BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome04238BLASTN svgBLASTP svg
NC_012724:25475002547500258413336634Burkholderia glumae BGR1 chromosome 1, complete genome04195BLASTN svgBLASTP svg
NC_015383:22903622903624724318208Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence03713BLASTN svgBLASTP svg
NC_008060:306170*30617034178635617Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence02319BLASTN svgBLASTP svg
NC_010515:26910002691000272570834709Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence02317BLASTN svgBLASTP svg
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence02317BLASTN svgBLASTP svg
NC_008543:28717472871747290125029504Burkholderia cenocepacia HI2424 chromosome 2, complete sequence02181BLASTN svgBLASTP svg
NC_008061:23685172368517239913930623Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence02159BLASTN svgBLASTP svg
NC_007651:2166000*2166000218478418785Burkholderia thailandensis E264 chromosome I, complete sequence02145BLASTN svgBLASTP svg
NC_014117:132524*13252417885446331Burkholderia sp. CCGE1002 chromosome chromosome 1, complete01243BLASTN svgBLASTP svg
NC_014118:15288511528851155111722267Burkholderia sp. CCGE1002 chromosome chromosome 2, complete01241BLASTN svgBLASTP svg
NC_010512:95152795152797635724831Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence01029BLASTN svgBLASTP svg
NC_010508:18985471898547192485126305Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence0997BLASTN svgBLASTP svg
NC_007650:832507*83250785444621940Burkholderia thailandensis E264 chromosome II, complete sequence0892BLASTN svgBLASTP svg
NC_006351:27597082759708280620746500Burkholderia pseudomallei K96243 chromosome 2, complete sequence1e-165591BLASTN svgBLASTP svg
NC_014722:16479781647978167820630229Burkholderia rhizoxinica HKI 454, complete genome2e-143517BLASTN svgBLASTP svg
NC_015383:36850036850039173623237Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence2e-121444BLASTN svgBLASTP svg
NC_008061:18642821864282188910424823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence7e-106392BLASTN svgBLASTP svg
NC_014924:30654303065430309278427355Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome3e-102381BLASTN svgBLASTP svg
NC_013722:28483662848366287177723412Xanthomonas albilineans, complete genome3e-86327BLASTN svgBLASTP svg
NC_008543:58212958212961104528917Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-85325BLASTN svgBLASTP svg
NC_003295:27173627173629326221527Ralstonia solanacearum GMI1000, complete genome1e-64256BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-63252BLASTN svgBLASTP svg
NC_009074:14706891470689150586435176Burkholderia pseudomallei 668 chromosome I, complete sequence6e-63250BLASTN svgBLASTP svg
NC_012856:737170*73717079740260233Ralstonia pickettii 12D chromosome 1, complete genome2e-59238BLASTN svgBLASTP svg
NC_007973:49960649960652396824363Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-59238BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome2e-56228BLASTN svgBLASTP svg
NC_007434:1809946*1809946187124661301Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-53218BLASTN svgBLASTP svg
NC_007511:13009781300978132645425477Burkholderia sp. 383 chromosome 2, complete sequence2e-53218BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-53218BLASTN svgBLASTP svg
NC_007973:27734272773427279771424288Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-53218BLASTN svgBLASTP svg
NC_010551:20079262007926203080722882Burkholderia ambifaria MC40-6 chromosome 1, complete sequence3e-52214BLASTN svgBLASTP svg
NC_009075:93778293778296831430533Burkholderia pseudomallei 668 chromosome II, complete sequence8e-47196BLASTN svgBLASTP svg
NC_011662:1160887*1160887119009929213Thauera sp. MZ1T, complete genome3e-46194BLASTN svgBLASTP svg
NC_009078:86279686279689418031385Burkholderia pseudomallei 1106a chromosome II, complete sequence2e-44188BLASTN svgBLASTP svg
NC_015382:17221317221319334021128Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence3e-43184BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome1e-42182BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-42182BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-42182BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-42182BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-40174BLASTN svgBLASTP svg
NC_007434:2386036*2386036240759921564Burkholderia pseudomallei 1710b chromosome I, complete sequence3e-40174BLASTN svgBLASTP svg
NC_006350:1938631*1938631199668958059Burkholderia pseudomallei K96243 chromosome 1, complete sequence3e-40174BLASTN svgBLASTP svg
NC_006351:88165588165591405032396Burkholderia pseudomallei K96243 chromosome 2, complete sequence1e-39172BLASTN svgBLASTP svg
NC_007435:27012422701242273492033679Burkholderia pseudomallei 1710b chromosome II, complete sequence7e-38167BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome3e-37165BLASTN svgBLASTP svg
NC_014910:17650651765065179274827684Alicycliphilus denitrificans BC chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_012856:10800001080000110535625357Ralstonia pickettii 12D chromosome 1, complete genome7e-35157BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete7e-35157BLASTN svgBLASTP svg
NC_009075:15017150174611331097Burkholderia pseudomallei 668 chromosome II, complete sequence1e-33153BLASTN svgBLASTP svg
NC_015422:910292*91029293677826487Alicycliphilus denitrificans K601 chromosome, complete genome3e-31145BLASTN svgBLASTP svg
NC_015422:45080284508028454712739100Alicycliphilus denitrificans K601 chromosome, complete genome3e-31145BLASTN svgBLASTP svg
NC_010676:27932372793237283212038884Burkholderia phytofirmans PsJN chromosome 2, complete sequence3e-31145BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_014153:16635971663597168818424588Thiomonas intermedia K12 chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_012721:13954171395417142220626790Burkholderia glumae BGR1 chromosome 2, complete genome2e-28135BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_007650:42074542074544753126787Burkholderia thailandensis E264 chromosome II, complete sequence4e-24121BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence4e-24121BLASTN svgBLASTP svg
NC_007651:1620000*1620000165256732568Burkholderia thailandensis E264 chromosome I, complete sequence4e-24121BLASTN svgBLASTP svg
NC_007651:17264721726472175232825857Burkholderia thailandensis E264 chromosome I, complete sequence4e-24121BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence4e-24121BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome4e-24121BLASTN svgBLASTP svg
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome4e-24121BLASTN svgBLASTP svg
NC_008782:75268675268678696734282Acidovorax sp. JS42, complete genome4e-24121BLASTN svgBLASTP svg
NC_008782:867344*86734489009922756Acidovorax sp. JS42, complete genome4e-24121BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome1e-23119BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome4e-21111BLASTN svgBLASTP svg
NC_013446:1724000*1724000175930835309Comamonas testosteroni CNB-2, complete genome4e-21111BLASTN svgBLASTP svg
NC_013446:21649742164974219310328130Comamonas testosteroni CNB-2, complete genome4e-21111BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome4e-21111BLASTN svgBLASTP svg
NC_013446:41828784182878420121918342Comamonas testosteroni CNB-2, complete genome4e-21111BLASTN svgBLASTP svg
NC_015733:29635482963548298726023713Pseudomonas putida S16 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_012720:11448911448914149927011Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence6e-20107BLASTN svgBLASTP svg
NC_012811:31730831730834221324906Methylobacterium extorquens AM1 megaplasmid, complete sequence6e-20107BLASTN svgBLASTP svg
NC_011002:70319470319475464351450Burkholderia cenocepacia J2315 chromosome 3, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_010508:809974*80997484542135448Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_012721:979656979656100222522570Burkholderia glumae BGR1 chromosome 2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013446:26559552655955268195826004Comamonas testosteroni CNB-2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015376:32497733249773327345123679Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-1695.6BLASTN svgBLASTP svg
NC_008048:38964538964542759937955Sphingopyxis alaskensis RB2256, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015733:25813242581324263433453011Pseudomonas putida S16 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002929:2589202*2589202261209922898Bordetella pertussis Tohama I, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002929:3568106*3568106359523227127Bordetella pertussis Tohama I, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010515:1618093*1618093165515937067Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_016010:63753563753566446226928Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_008043:499399*49939952304123643Silicibacter sp. TM1040 mega plasmid, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_010515:12052581205258122726722010Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_015563:19513681951368199617644809Delftia sp. Cs1-4 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007614:16333321633332165692623595Nitrosospira multiformis ATCC 25196 chromosome 1, complete3e-1281.8BLASTN svgBLASTP svg
NC_007508:68904668904671040421359Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007964:32882532882536913940315Nitrobacter hamburgensis X14, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010688:673454*67345470601432561Xanthomonas campestris pv. campestris, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011004:11748131174813119811023298Rhodopseudomonas palustris TIE-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008391:69922269922271789818677Burkholderia cepacia AMMD chromosome 2, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_010338:2443765*2443765246613122367Caulobacter sp. K31, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011144:2710876*2710876272938418509Phenylobacterium zucineum HLK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete3e-0971.9BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008062:813388133810014818811Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_008544:55451554517864523195Burkholderia cenocepacia HI2424 chromosome 3, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_014722:77148377148379485123369Burkholderia rhizoxinica HKI 454, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-0765.9BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010627:233572*23357225652922958Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010515:13750911375091141715142061Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010508:1206498*1206498122498518488Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010067:51000510007450923510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-0661.9BLASTN svgBLASTP svg
NC_007974:10078341007834103035922526Ralstonia metallidurans CH34 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013446:45116024511602453459922998Comamonas testosteroni CNB-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,3e-0661.9BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:35538093553809358001526207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014121:16826381682638172492542288Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome3e-0661.9BLASTN svgBLASTP svg