Pre_GI: BLASTN Hits

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Query: NC_008309:190550 Haemophilus somnus 129PT, complete genome

Start: 190550, End: 222599, Length: 32050

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is an asymptomatic carrier strain that was serum-resistant. Causes disease in cattle. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008309:84207284207286931527244Haemophilus somnus 129PT, complete genome01346BLASTN svgBLASTP svg
NC_008309:1851189*1851189187944728259Haemophilus somnus 129PT, complete genome6e-147529BLASTN svgBLASTP svg
NC_008309:1200245*1200245121859918355Haemophilus somnus 129PT, complete genome2e-140507BLASTN svgBLASTP svg
NC_008309:38559238559240909923508Haemophilus somnus 129PT, complete genome8e-137496BLASTN svgBLASTP svg
NC_008309:11552181155218117824923032Haemophilus somnus 129PT, complete genome2e-122448BLASTN svgBLASTP svg
NC_008309:12893701289370131490625537Haemophilus somnus 129PT, complete genome6e-110406BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome8e-106392BLASTN svgBLASTP svg
NC_008309:502983*50298352926826286Haemophilus somnus 129PT, complete genome1e-36163BLASTN svgBLASTP svg
CP002516:4081484*4081484410409522612Escherichia coli KO11, complete genome8e-26127BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome8e-26127BLASTN svgBLASTP svg
NC_012968:239476*23947626753528060Methylotenera mobilis JLW8, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008150:4561633*4561633458159919967Yersinia pestis Antiqua, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008149:402599*40259942390621308Yersinia pestis Nepal516, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_005810:42245004224500424264818149Yersinia pestis biovar Microtus str. 91001, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_004088:41166764116676413528618611Yersinia pestis KIM, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003143:483395*48339550335019956Yersinia pestis CO92, complete genome1e-0973.8BLASTN svgBLASTP svg