Pre_GI: BLASTN Hits

Some Help

Query: NC_008278:5053899 Frankia alni ACN14a, complete genome

Start: 5053899, End: 5086627, Length: 32729

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013169:12900001290000131283622837Kytococcus sedentarius DSM 20547, complete genome4e-86327BLASTN svgBLASTP svg
NC_011146:22001422200142224285442713Geobacter bemidjiensis Bem, complete genome4e-49204BLASTN svgBLASTP svg
NC_014972:10351241035124106227327150Desulfobulbus propionicus DSM 2032 chromosome, complete genome7e-48200BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome2e-45192BLASTN svgBLASTP svg
NC_020126:58494835849483587209922617Myxococcus stipitatus DSM 14675, complete genome9e-41176BLASTN svgBLASTP svg
NC_011004:4947980*4947980497058322604Rhodopseudomonas palustris TIE-1, complete genome1e-39172BLASTN svgBLASTP svg
NC_005296:45742134574213461698142769Rhodopseudomonas palustris CGA009, complete genome1e-39172BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome5e-33151BLASTN svgBLASTP svg
CP002185:11921*119213722925309Escherichia coli W, complete genome2e-32149BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome5e-30141BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome2e-29139BLASTN svgBLASTP svg
NC_014216:1061265*1061265108505223788Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
CU928145:11394*113943596224569Escherichia coli 55989 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
CU928160:11381*113813595024570Escherichia coli IAI1 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_009800:12162*121623729725136Escherichia coli HS, complete genome1e-27133BLASTN svgBLASTP svg
NC_011748:11394*113943596224569Escherichia coli 55989, complete genome1e-27133BLASTN svgBLASTP svg
NC_011750:12047*120474221230166Escherichia coli IAI39 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_004129:957890*95789098009922210Pseudomonas fluorescens Pf-5, complete genome5e-27131BLASTN svgBLASTP svg
NC_014972:37716423771642379462522984Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_012560:4311906*4311906433613924234Azotobacter vinelandii DJ, complete genome3e-25125BLASTN svgBLASTP svg
NC_021150:4311902*4311902433613524234Azotobacter vinelandii CA6, complete genome3e-25125BLASTN svgBLASTP svg
NC_008278:14727091472709149653023822Frankia alni ACN14a, complete genome1e-21113BLASTN svgBLASTP svg
NC_015942:10475761047576107197424399Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015656:36534403653440367842924990Frankia symbiont of Datisca glomerata chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015656:1947810*1947810196775019941Frankia symbiont of Datisca glomerata chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_019673:75980267598026762632928304Saccharothrix espanaensis DSM 44229 complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015161:523278*52327854807924802Deinococcus proteolyticus MRP chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014836:155924*15592417823722314Desulfurispirillum indicum S5 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015389:2030154*2030154207584945696Coriobacterium glomerans PW2 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007947:79745679745682317625721Methylobacillus flagellatus KT, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015656:14695011469501148804818548Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015656:1592021*1592021161171419694Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015656:3232809*3232809325197319165Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015656:33007473300747332502424278Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015656:48799044879904490330023397Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008095:74992557499255752215922905Myxococcus xanthus DK 1622, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010337:14455121445512146809922588Heliobacterium modesticaldum Ice1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013124:17841171784117180777323657Acidimicrobium ferrooxidans DSM 10331, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007907:45616445616447759921436Desulfitobacterium hafniense Y51, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009454:48995448995451152821575Pelotomaculum thermopropionicum SI, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015656:16183291618329163809919771Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_001263:66266666266668995627291Deinococcus radiodurans R1 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008278:28825672882567290171919153Frankia alni ACN14a, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008278:28633552863355288511221758Frankia alni ACN14a, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008319:10816141081614110985128238Synechococcus sp. CC9311, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010483:36352536352538629422770Thermotoga sp. RQ2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013642:32379932379934694523147Thermotoga naphthophila RKU-10, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015320:13421051342105138222040116Archaeoglobus veneficus SNP6 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015519:2526047*2526047256306637020Tepidanaerobacter sp. Re1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_000853:56957656957659272823153Thermotoga maritima MSB8, complete genome4e-0661.9BLASTN svgBLASTP svg