Pre_GI: BLASTN Hits

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Query: NC_007948:4620661 Polaromonas sp. JS666, complete genome

Start: 4620661, End: 4643252, Length: 22592

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007948:4646344*4646344469438848045Polaromonas sp. JS666, complete genome8e-53216BLASTN svgBLASTP svg
NC_007974:78521678521680824923034Ralstonia metallidurans CH34 chromosome 2, complete sequence1e-48202BLASTN svgBLASTP svg
NC_008391:24044432404443242322518783Burkholderia cepacia AMMD chromosome 2, complete sequence3e-18101BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013889:17408581740858176918228325Thioalkalivibrio sp. K90mix chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006461:95381795381797653122715Thermus thermophilus HB8, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018750:51144345114434513594121508Streptomyces venezuelae ATCC 10712, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008786:14279714279716109918303Verminephrobacter eiseniae EF01-2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004369:24654612465461248656121101Corynebacterium efficiens YS-314, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010102:21785942178594220346224869Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-0867.9BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011982:20678420678423168124898Agrobacterium vitis S4 plasmid pTiS4, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_015953:47934844793484481122917746Streptomyces sp. SirexAA-E chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004463:60225602258376823544Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007908:10101621010162103411423953Rhodoferax ferrireducens T118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012029:904780*90478093723732458Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013172:31417393141739316451822780Brachybacterium faecium DSM 4810, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015061:2867027*2867027288717520149Rahnella sp. Y9602 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:27250027250029566023161Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015588:24682072468207249482226616Isoptericola variabilis 225 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003305:17439391743939177259928661Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-0763.9BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007677:35054873505487352560020114Salinibacter ruber DSM 13855, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014844:21583182158318217659218275Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015588:1463628*1463628149116227535Isoptericola variabilis 225 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015968:2583721*2583721261035326633Enterobacter asburiae LF7a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003063:30496230496233428329322Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-0763.9BLASTN svgBLASTP svg
NC_005085:659378*65937868456625189Chromobacterium violaceum ATCC 12472, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007963:26449302644930268018935260Chromohalobacter salexigens DSM 3043, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010572:28435892843589286504421456Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012880:13550813550816052825021Dickeya dadantii Ech703, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013282:551219*55121958904737829Cronobacter turicensis, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003911:253400*25340027913725738Silicibacter pomeroyi DSS-3, complete genome3e-0661.9BLASTN svgBLASTP svg