Query: NC_007946:3125577 Escherichia coli UTI89, complete genome
Start: 3125577, End: 3149320, Length: 23744
Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008253:2965573 | 2965573 | 2989538 | 23966 | Escherichia coli 536, complete genome | 0 | 40610 | BLASTN svg | BLASTP svg |
NC_010498:3023442* | 3023442 | 3047515 | 24074 | Escherichia coli SMS-3-5, complete genome | 0 | 29220 | BLASTN svg | BLASTP svg |
NC_007613:2699500* | 2699500 | 2721618 | 22119 | Shigella boydii Sb227, complete genome | 0 | 24750 | BLASTN svg | BLASTP svg |
NC_009648:3476000 | 3476000 | 3498294 | 22295 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 0 | 1451 | BLASTN svg | BLASTP svg |
NC_008563:3119284 | 3119284 | 3143301 | 24018 | Escherichia coli APEC O1, complete genome | 0 | 1273 | BLASTN svg | BLASTP svg |
NC_004088:2937077 | 2937077 | 2962919 | 25843 | Yersinia pestis KIM, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_013282:2026083 | 2026083 | 2080198 | 54116 | Cronobacter turicensis, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_010465:2820500 | 2820500 | 2869782 | 49283 | Yersinia pseudotuberculosis YPIII, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
NC_007348:2011957 | 2011957 | 2035232 | 23276 | Ralstonia eutropha JMP134 chromosome 2, complete sequence | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_009348:2738742 | 2738742 | 2761729 | 22988 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_010694:3055403 | 3055403 | 3078806 | 23404 | Erwinia tasmaniensis, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_009778:1956225 | 1956225 | 1982551 | 26327 | Enterobacter sakazakii ATCC BAA-894, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_007712:3382000 | 3382000 | 3408242 | 26243 | Sodalis glossinidius str. 'morsitans', complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_014121:1822895 | 1822895 | 1846624 | 23730 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009648:1487692 | 1487692 | 1519045 | 31354 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014837:3766426 | 3766426 | 3795237 | 28812 | Pantoea sp. At-9b chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010501:3575726 | 3575726 | 3605099 | 29374 | Pseudomonas putida W619, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012962:4427000 | 4427000 | 4454069 | 27070 | Photorhabdus asymbiotica, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_004459:1794540* | 1794540 | 1820119 | 25580 | Vibrio vulnificus CMCP6 chromosome I, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_005126:3812054 | 3812054 | 3880790 | 68737 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009648:2465613* | 2465613 | 2497208 | 31596 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012962:3568046 | 3568046 | 3620476 | 52431 | Photorhabdus asymbiotica, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |