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Query: NC_007946:3125577 Escherichia coli UTI89, complete genome

Start: 3125577, End: 3149320, Length: 23744

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008253:29655732965573298953823966Escherichia coli 536, complete genome040610BLASTN svgBLASTP svg
NC_010498:3023442*3023442304751524074Escherichia coli SMS-3-5, complete genome029220BLASTN svgBLASTP svg
NC_007613:2699500*2699500272161822119Shigella boydii Sb227, complete genome024750BLASTN svgBLASTP svg
NC_009648:34760003476000349829422295Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome01451BLASTN svgBLASTP svg
NC_008563:31192843119284314330124018Escherichia coli APEC O1, complete genome01273BLASTN svgBLASTP svg
NC_004088:29370772937077296291925843Yersinia pestis KIM, complete genome4e-27131BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome1e-26129BLASTN svgBLASTP svg
NC_010465:28205002820500286978249283Yersinia pseudotuberculosis YPIII, complete genome9e-25123BLASTN svgBLASTP svg
NC_007348:20119572011957203523223276Ralstonia eutropha JMP134 chromosome 2, complete sequence5e-20107BLASTN svgBLASTP svg
NC_009348:27387422738742276172922988Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-19105BLASTN svgBLASTP svg
NC_010694:30554033055403307880623404Erwinia tasmaniensis, complete genome8e-19103BLASTN svgBLASTP svg
NC_009778:19562251956225198255126327Enterobacter sakazakii ATCC BAA-894, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007712:33820003382000340824226243Sodalis glossinidius str. 'morsitans', complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014121:18228951822895184662423730Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010501:35757263575726360509929374Pseudomonas putida W619, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012962:44270004427000445406927070Photorhabdus asymbiotica, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004459:1794540*1794540182011925580Vibrio vulnificus CMCP6 chromosome I, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_005126:38120543812054388079068737Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009648:2465613*2465613249720831596Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012962:35680463568046362047652431Photorhabdus asymbiotica, complete genome3e-0661.9BLASTN svgBLASTP svg