Pre_GI: BLASTN Hits

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Query: NC_007762:88979 Rhizobium etli CFN 42 plasmid p42a, complete sequence

Start: 88979, End: 114840, Length: 25862

Host Lineage: Rhizobium etli; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It is a nitrogen-fixing symbiotic bacteria that interacts with the root of the common bean plant Phaseolus vulgaris. P. etli and its relation to other nitrogen/fixing symbionts has been well studied. The genomic sequence will provide information on the process of symbiosis, on the genetic systems that allow the survival and adaptations of this bacteria to the soil, and on the evolutionary relationship and the symbiosis origin of this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007761:241900*24190026263520736Rhizobium etli CFN 42, complete genome05547BLASTN svgBLASTP svg
NC_008380:85524685524689413738892Rhizobium leguminosarum bv. viciae 3841, complete genome01051BLASTN svgBLASTP svg
NC_011991:65368653689197126604Agrobacterium vitis S4 plasmid pAtS4b, complete sequence3e-65258BLASTN svgBLASTP svg
NC_014816:23570002357000239416937170Asticcacaulis excentricus CB 48 chromosome 1, complete sequence6e-54220BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome8e-44186BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome3e-37165BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome3e-37165BLASTN svgBLASTP svg
NC_010125:955863*955863100278546923Gluconacetobacter diazotrophicus PAl 5, complete genome1e-33153BLASTN svgBLASTP svg
NC_009050:212270*21227028083968570Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence3e-31145BLASTN svgBLASTP svg
NC_019973:27440002744000276369719698Mesorhizobium australicum WSM2073, complete genome6e-29137BLASTN svgBLASTP svg
NC_015675:28390002839000285961920620Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-29137BLASTN svgBLASTP svg
NC_014923:26720002672000269164419645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete6e-29137BLASTN svgBLASTP svg
NC_009720:2489003*2489003251980530803Xanthobacter autotrophicus Py2, complete genome3e-28135BLASTN svgBLASTP svg
NC_013860:17123517123519663525401Azospirillum sp. B510 plasmid pAB510f, complete sequence2e-25125BLASTN svgBLASTP svg
NC_013857:478000*47800050109923100Azospirillum sp. B510 plasmid pAB510c, complete sequence2e-25125BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence2e-25125BLASTN svgBLASTP svg
NC_013854:513196*51319653916325968Azospirillum sp. B510, complete genome2e-25125BLASTN svgBLASTP svg
NC_010994:85950085950087980320304Rhizobium etli CIAT 652, complete genome2e-25125BLASTN svgBLASTP svg
NC_008043:86470*8647010848022011Silicibacter sp. TM1040 mega plasmid, complete sequence4e-24121BLASTN svgBLASTP svg
NC_011983:76011376011378659926487Agrobacterium radiobacter K84 chromosome 2, complete genome4e-21111BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome6e-20107BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome2e-19105BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_020453:93639693639697628939894Agromonas oligotrophica S58 DNA, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015730:36933913693391372064027250Roseobacter litoralis Och 149 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014816:545441*54544157145526015Asticcacaulis excentricus CB 48 chromosome 1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_008347:30341003034100305916425065Maricaulis maris MCS10, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007958:23706192370619240281732199Rhodopseudomonas palustris BisB5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011004:24577782457778249046532688Rhodopseudomonas palustris TIE-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011987:53760537608309929340Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_011757:12460001246000128589739898Methylobacterium chloromethanicum CM4, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003317:14438741443874146565121778Brucella melitensis 16M chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete3e-0971.9BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete3e-0971.9BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete3e-0971.9BLASTN svgBLASTP svg
NC_007794:15530001553000157259919600Novosphingobium aromaticivorans DSM 12444, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003305:17439391743939177259928661Agrobacterium tumefaciens str. C58 chromosome linear, complete2e-0765.9BLASTN svgBLASTP svg
NC_003063:30496230496233428329322Agrobacterium tumefaciens str. C58 chromosome linear, complete2e-0765.9BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_011894:3820000*3820000384954329544Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013209:1531366*1531366154959918234Acetobacter pasteurianus IFO 3283-01, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010172:12221501222150124149019341Methylobacterium extorquens PA1, complete genome3e-0661.9BLASTN svgBLASTP svg