Query: NC_007005:5882205 Pseudomonas syringae pv. syringae B728a, complete genome
Start: 5882205, End: 5921003, Length: 38799
Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_005773:106000* | 106000 | 150880 | 44881 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 0 | 13750 | BLASTN svg | BLASTP svg |
NC_005773:5734733 | 5734733 | 5761099 | 26367 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 0 | 3017 | BLASTN svg | BLASTP svg |
NC_005773:1675793 | 1675793 | 1698612 | 22820 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 0 | 1386 | BLASTN svg | BLASTP svg |
NC_002947:3492379 | 3492379 | 3517099 | 24721 | Pseudomonas putida KT2440, complete genome | 0 | 644 | BLASTN svg | BLASTP svg |
NC_010501:2796000 | 2796000 | 2818695 | 22696 | Pseudomonas putida W619, complete genome | 8e-88 | 333 | BLASTN svg | BLASTP svg |
NC_015733:1793399* | 1793399 | 1818021 | 24623 | Pseudomonas putida S16 chromosome, complete genome | 3e-72 | 281 | BLASTN svg | BLASTP svg |
NC_010501:4311873* | 4311873 | 4334340 | 22468 | Pseudomonas putida W619, complete genome | 2e-39 | 172 | BLASTN svg | BLASTP svg |
NC_020209:4643901 | 4643901 | 4667113 | 23213 | Pseudomonas poae RE*1-1-14, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_015563:3309097 | 3309097 | 3342763 | 33667 | Delftia sp. Cs1-4 chromosome, complete genome | 8e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_007952:1934249 | 1934249 | 1958014 | 23766 | Burkholderia xenovorans LB400 chromosome 2, complete sequence | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015379:6714545 | 6714545 | 6742160 | 27616 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010465:429095 | 429095 | 452493 | 23399 | Yersinia pseudotuberculosis YPIII, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_008149:4053363 | 4053363 | 4072744 | 19382 | Yersinia pestis Nepal516, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_005810:4469156 | 4469156 | 4488730 | 19575 | Yersinia pestis biovar Microtus str. 91001, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_004088:266543 | 266543 | 285923 | 19381 | Yersinia pestis KIM, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_003143:4006884 | 4006884 | 4028579 | 21696 | Yersinia pestis CO92, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_005085:1269787* | 1269787 | 1328434 | 58648 | Chromobacterium violaceum ATCC 12472, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_006155:4302826 | 4302826 | 4324579 | 21754 | Yersinia pseudotuberculosis IP 32953, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009832:3313058 | 3313058 | 3336433 | 23376 | Serratia proteamaculans 568, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012792:385670 | 385670 | 409914 | 24245 | Variovorax paradoxus S110 chromosome 2, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008752:4147715 | 4147715 | 4171353 | 23639 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008752:3828438 | 3828438 | 3852328 | 23891 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008752:261903 | 261903 | 282106 | 20204 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008752:2334511* | 2334511 | 2360126 | 25616 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 7e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002947:4604582 | 4604582 | 4628676 | 24095 | Pseudomonas putida KT2440, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010002:4890192 | 4890192 | 4910006 | 19815 | Delftia acidovorans SPH-1, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015138:2110149 | 2110149 | 2134842 | 24694 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015563:2656628 | 2656628 | 2684877 | 28250 | Delftia sp. Cs1-4 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014931:6203872 | 6203872 | 6250517 | 46646 | Variovorax paradoxus EPS chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_015379:4630367 | 4630367 | 4665599 | 35233 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013961:3083816 | 3083816 | 3106099 | 22284 | Erwinia amylovora, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012962:3463644 | 3463644 | 3498411 | 34768 | Photorhabdus asymbiotica, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012214:745302 | 745302 | 766959 | 21658 | Erwinia pyrifoliae Ep1/96, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003198:331314 | 331314 | 357099 | 25786 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |