Pre_GI: BLASTN Hits

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Query: NC_004917:366104 Helicobacter hepaticus ATCC 51449, complete genome

Start: 366104, End: 390569, Length: 24466

Host Lineage: Helicobacter hepaticus; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This organism was found to be linked to an increasing incidence of liver tumors in mouse colonies at the National Cancer Institute in 1992. Normally it resides in the lower intestines, but it can cause chronic hepatitis. This organism has a similar urease gene cluster and cytolethal distending toxin as compared to Helicobacter pylori, but lacks other virulence factors such as the vacuolating cytotoxin and the cag pathogenicity island. However, it does contain a pathogenicity island that encodes proteins similar to those found in a type IV secretion system. Causes liver disease. This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). This species was associated with an increase in liver tumors. It can cause active chronic hepatitis and typhlitis (inflammation of a region at the beginning of the large intestine), hepatocellular tumors, and gastric bowel disease in various mice strains.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004917:24105324105326425023198Helicobacter hepaticus ATCC 51449, complete genome7e-146525BLASTN svgBLASTP svg
NC_014335:21514042151404217409922696Bacillus cereus biovar anthracis str. CI chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_012472:22400002240000226209922100Bacillus cereus 03BB102, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007530:21759672175967219810122135Bacillus anthracis str. 'Ames Ancestor', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005957:21960002196000221809922100Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-0765.9BLASTN svgBLASTP svg
NC_005945:21758712175871219809922229Bacillus anthracis str. Sterne, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003997:21758432175843219809922257Bacillus anthracis str. Ames, complete genome2e-0765.9BLASTN svgBLASTP svg