Pre_GI: BLASTN Hits

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Query: NC_002947:6123608 Pseudomonas putida KT2440, complete genome

Start: 6123608, End: 6143751, Length: 20144

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome01225BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome01164BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome01152BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome0894BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome0886BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome0690BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome2e-176626BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome2e-142513BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-139504BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome3e-64254BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome3e-36161BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome8e-28133BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome8e-28133BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome8e-28133BLASTN svgBLASTP svg
NC_007484:16947381694738171826123524Nitrosococcus oceani ATCC 19707, complete genome2e-19105BLASTN svgBLASTP svg
NC_007484:16718351671835169794126107Nitrosococcus oceani ATCC 19707, complete genome2e-19105BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome3e-18101BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014836:33278332785876525488Desulfurispirillum indicum S5 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_011206:20400002040000206689226893Acidithiobacillus ferrooxidans ATCC 53993, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_015663:2090442*2090442212127330832Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009832:37032023703202372686423663Serratia proteamaculans 568, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009138:15448351544835157592231088Herminiimonas arsenicoxydans, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020211:16210001621000164274521746Serratia marcescens WW4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete4e-0867.9BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_008347:17400017400021080136802Maricaulis maris MCS10, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007952:14160001416000143886822869Burkholderia xenovorans LB400 chromosome 2, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_012968:15949541594954163297838025Methylotenera mobilis JLW8, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_018697:1343756*1343756139248048725Cycloclasticus sp. P1 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015733:25813242581324263433453011Pseudomonas putida S16 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014315:17444851744485177156527081Nitrosococcus watsoni C-113 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_008607:11663116633723225570Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence9e-0660BLASTN svgBLASTP svg