Query: NC_002505:168532 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete
Start: 168532, End: 200599, Length: 32068
Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria
General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015633:338000 | 338000 | 356683 | 18684 | Vibrio anguillarum 775 chromosome chromosome I, complete sequence | 0 | 5705 | BLASTN svg | BLASTP svg |
NC_009997:5188221 | 5188221 | 5227958 | 39738 | Shewanella baltica OS195, complete genome | 3e-34 | 155 | BLASTN svg | BLASTP svg |
NC_009092:4337617 | 4337617 | 4373805 | 36189 | Shewanella loihica PV-4, complete genome | 1e-30 | 143 | BLASTN svg | BLASTP svg |
NC_014541:4167916 | 4167916 | 4192497 | 24582 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 5e-30 | 141 | BLASTN svg | BLASTP svg |
CP002185:3822470 | 3822470 | 3859306 | 36837 | Escherichia coli W, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
CP002516:246767 | 246767 | 267453 | 20687 | Escherichia coli KO11, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_004741:4132056 | 4132056 | 4155782 | 23727 | Shigella flexneri 2a str. 2457T, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_007384:3897000 | 3897000 | 3916534 | 19535 | Shigella sonnei Ss046, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
AC_000091:3995233 | 3995233 | 4021223 | 25991 | Escherichia coli W3110 DNA, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
CU928145:3983432 | 3983432 | 4032688 | 49257 | Escherichia coli 55989 chromosome, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_000913:3624826* | 3624826 | 3665603 | 40778 | Escherichia coli K12, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_009800:3685651* | 3685651 | 3709099 | 23449 | Escherichia coli HS, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_010468:231000 | 231000 | 253346 | 22347 | Escherichia coli ATCC 8739, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_010473:3722571 | 3722571 | 3759295 | 36725 | Escherichia coli str. K-12 substr. DH10B, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_010634:4463727 | 4463727 | 4499178 | 35452 | Yersinia pseudotuberculosis PB1/+, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_011748:3983432 | 3983432 | 4032688 | 49257 | Escherichia coli 55989, complete genome | 5e-27 | 131 | BLASTN svg | BLASTP svg |
NC_007613:3470314 | 3470314 | 3509093 | 38780 | Shigella boydii Sb227, complete genome | 3e-25 | 125 | BLASTN svg | BLASTP svg |
NC_014121:5000069 | 5000069 | 5030575 | 30507 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 3e-22 | 115 | BLASTN svg | BLASTP svg |
NC_010498:3838419 | 3838419 | 3866836 | 28418 | Escherichia coli SMS-3-5, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_008570:236500 | 236500 | 259599 | 23100 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 5e-21 | 111 | BLASTN svg | BLASTP svg |
NC_009348:1064664* | 1064664 | 1098734 | 34071 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
NC_011751:4074586 | 4074586 | 4095243 | 20658 | Escherichia coli UMN026 chromosome, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_009778:4188000 | 4188000 | 4230440 | 42441 | Enterobacter sakazakii ATCC BAA-894, complete genome | 7e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_013416:875758* | 875758 | 901099 | 25342 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_008258:3581583 | 3581583 | 3608169 | 26587 | Shigella flexneri 5 str. 8401, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_006905:3717306 | 3717306 | 3740099 | 22794 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_004337:3621985 | 3621985 | 3646268 | 24284 | Shigella flexneri 2a str. 301, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008740:443274* | 443274 | 518916 | 75643 | Marinobacter aquaeolei VT8, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_013960:452493 | 452493 | 471930 | 19438 | Nitrosococcus halophilus Nc4 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_009801:3956917 | 3956917 | 3975338 | 18422 | Escherichia coli E24377A, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
CU928160:3709081 | 3709081 | 3730099 | 21019 | Escherichia coli IAI1 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
AP010958:4313462 | 4313462 | 4334790 | 21329 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
AC_000091:3976888 | 3976888 | 3995030 | 18143 | Escherichia coli W3110 DNA, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_012912:4071859 | 4071859 | 4117551 | 45693 | Dickeya zeae Ech1591, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_018419:226000 | 226000 | 248099 | 22100 | Secondary endosymbiont of Ctenarytaina eucalypti chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013416:386301* | 386301 | 408381 | 22081 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008322:4611000 | 4611000 | 4629038 | 18039 | Shewanella sp. MR-7, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008309:842072 | 842072 | 869315 | 27244 | Haemophilus somnus 129PT, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |