Pre_GI: BLASTP Hits

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Query: NC_020134:586840:592352 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 592352, End: 593929, Length: 1578

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:574145:5793185793185808711554Clostridium thermocellum ATCC 27405, complete genomeflagellar M-ring protein FliF2e-87323
NC_014652:628435:6360106360106376921683Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar m-ring protein flif8e-24112
NC_014721:434501:4513464513464530281683Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeflagellar m-ring protein flif8e-23108
NC_018664:1663324:1684116168411616856691554Clostridium acidurici 9a chromosome, complete genomeflagellar MS-ring protein FliF3e-21103
NC_014377:1060000:1073721107372110752741554Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar M-ring protein FliF1e-1688.6
NC_011899:1807365:1809171180917118107301560Halothermothrix orenii H 168, complete genomeflagellar M-ring protein FliF1e-1688.6
NC_010718:1454087:1462715146271514642741560Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar M-ring protein FliF8e-1685.5
NC_015391:2059191:2087756208775620893301575Carnobacterium sp. 17-4 chromosome, complete genomeflagellar M-ring protein9e-1479
NC_010520:2860960:2874315287431528758951581Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar M-ring protein fliF3e-1273.6
NC_017297:2854934:2860865286086528624451581Clostridium botulinum F str. 230613 chromosome, complete genomefliF; flagellar M-ring protein FliF4e-1273.2
NC_009697:2714668:2725866272586627274461581Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar MS-ring protein6e-1272.8
NC_009698:2649453:2662793266279326643731581Clostridium botulinum A str. Hall chromosome, complete genomeflagellar MS-ring protein6e-1272.8
NC_010674:858397:8583978583978599591563Clostridium botulinum B str. Eklund 17B, complete genomeflagellar M-ring protein FliF2e-1171.2
NC_015589:1240197:1267884126788412694431560Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar M-ring protein FliF2e-1067.4
NC_010723:833870:8366888366888382501563Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar M-ring protein FliF5e-1066.6
NC_009633:2725128:2738092273809227396451554Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar M-ring protein FliF2e-0861.2
NC_019978:625476:6317716317716333151545Halobacteroides halobius DSM 5150, complete genomeflagellar basal-body M-ring protein/flagellar hook-basal body protein FliF2e-0861.2
NC_009253:2615777:2628811262881126303761566Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar MS-ring protein1e-0758.5
NC_020291:4903981:4937190493719049387611572Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar M-ring protein FliF1e-0655.5
NC_013891:640784:6525096525096541521644Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar M-ring protein1e-0655.1
NC_016011:678419:6972476972476988901644Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar basal-body M-ring protein FliF3e-0653.9