Pre_GI: BLASTP Hits

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Query: NC_020134:1243122:1243122 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1243122, End: 1244381, Length: 1260

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3205333:3228073322807332323774305Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein9e-104377
NC_015275:2712991:2712991271299127172114221Clostridium lentocellum DSM 5427 chromosome, complete genomeCoA-substrate-specific enzyme activase2e-103376
NC_009012:1595498:1613874161387416181754302Clostridium thermocellum ATCC 27405, complete genomeputative CoA-substrate-specific enzyme activase9e-103374
NC_009922:2323083:2344275234427523485614287Alkaliphilus oremlandii OhILAs, complete genomeputative CoA-substrate-specific enzyme activase3e-100365
NC_021184:569653:5696535696535739394287Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein1e-99363
NC_013171:342714:3533263533263576004275Anaerococcus prevotii DSM 20548, complete genomeCoA-substrate-specific enzyme activase4e-99362
NC_017215:1499179:1519392151939215241524761Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Activator of (R)-2-hydroxyglutaryl-CoA dehydratase8e-93341
NC_017214:191791:2120042120042167644761Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeActivator of (R)-2-hydroxyglutaryl-CoA dehydratase8e-93341
NC_011835:625472:6456876456876503544668Bifidobacterium animalis subsp. lactis AD011 chromosome, completeactivator of 2-hydroxyglutaryl-CoA dehydratase2e-92340
NC_017216:1494190:1514403151440315190794677Bifidobacterium animalis subsp. lactis BLC1, complete genomeputative CoA-substrate-specific enzyme activase1e-92340
NC_012815:1494263:1514476151447615191944719Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein1e-92340
NC_012814:1494331:1514758151475815194764719Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein1e-92340
NC_017217:1499832:1520045152004515247634719Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein1e-92340
NC_020291:1535402:1557937155793715621694233Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative CoA-substrate-specific enzyme activase1e-58227
NC_017098:1542284:1577543157754315820184476Spirochaeta africana DSM 8902 chromosome, complete genomeactivator of 2-hydroxyglutaryl-CoA dehydratase3e-58226
NC_014484:1690272:1690272169027216947054434Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein3e-55216
NC_015578:1430112:1430112143011214345364425Treponema primitia ZAS-2 chromosome, complete genomeCoA enzyme activase4e-52206
NC_013410:3192836:3192836319283631972874452Fibrobacter succinogenes subsp. succinogenes S85 chromosome,CoA-substrate-specific enzyme activase9e-52204
NC_009663:2184594:2184594218459421861021509Sulfurovum sp. NBC37-1, complete genomehypothetical protein8e-1788.6
NC_016584:1436710:1458512145851214596181107Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein1e-1481.3
NC_015732:2762424:2777720277772027823304611Spirochaeta caldaria DSM 7334 chromosome, complete genomeCoA-substrate-specific enzyme activase1e-1067.8
NC_011145:4365730:4365730436573043699984269Anaeromyxobacter sp. K, complete genomeCoA-substrate-specific enzyme activase6e-1065.9
NC_014377:1227850:1230332123033212314411110Thermosediminibacter oceani DSM 16646 chromosome, complete genomehypothetical protein6e-1065.5
NC_010003:1746319:1755877175587717603404464Petrotoga mobilis SJ95, complete genomeCoA-substrate-specific enzyme activase5e-0962.8
NC_009483:1779601:1788572178857217897621191Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-0654.7