Pre_GI Gene

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Host: NC_013410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013410:3192836 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
319283631972874452CoA-substrate-specific enzyme activaseQuickGO ontologyBLASTP
319747431985081035hypothetical proteinBLASTP
319864732000801434hypothetical proteinBLASTP
320013732014591323hypothetical proteinBLASTP
320148232027711290hypothetical proteinBLASTP
32029653203963999hypothetical proteinBLASTP
320408132055411461hypothetical proteinBLASTP
320558132073231743hypothetical proteinBLASTP
32074243207714291excinuclease ABC C subunit domain proteinQuickGO ontologyBLASTP
32078093208045237XRE family plasmid maintenance system antidote proteinQuickGO ontologyBLASTP
320812432094521329peptidase U62 modulator of DNA gyraseQuickGO ontologyBLASTP
32095213210075555hypothetical protein
32102503210591342hypothetical proteinBLASTP
321083832118961059hypothetical protein
32127633213494732hypothetical protein
321355432155872034hypothetical proteinBLASTP
32156503216204555hypothetical protein
321629032185752286metal dependent phosphohydrolaseQuickGO ontologyBLASTP
32187113219412702hypothetical proteinBLASTP
32194613220162702hypothetical proteinBLASTP
322039132256645274hypothetical protein
322571032281002391hypothetical proteinBLASTP
322813532319323798hypothetical protein
323193432364724539hypothetical protein