Pre_GI: BLASTP Hits

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Query: NC_017986:1885613:1908432 Pseudomonas putida ND6 chromosome, complete genome

Start: 1908432, End: 1910117, Length: 1686

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:6224221:6241571624157162432141644Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S4e-118425
NC_014394:3114648:3132320313232031340411722Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction modification system DNA specificity domain2e-108393
NC_009943:940835:9510329510329527651734Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain1e-97357
NC_002947:5386489:5396987539698753987171731Pseudomonas putida KT2440, complete genometype I restriction-modification system, S subunit5e-93342
NC_010468:4059436:4070347407034740721041758Escherichia coli ATCC 8739, complete genomerestriction modification system DNA specificity domain4e-91335
NC_009665:2352528:2352528235252823543781851Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit8e-78291
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity2e-77290
NC_014306:4376012:4402909440290944046391731Erwinia billingiae Eb661, complete genomeType I restriction-modification system, S subunit3e-74280
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit3e-67256
NC_008639:1573971:1587158158715815888311674Chlorobium phaeobacteroides DSM 266, complete genomerestriction modification system DNA specificity domain6e-62239
NC_004603:370320:3874733874733892241752Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative HsdS polypeptide, part of CfrA family2e-57224
NC_020541:2551539:2562003256200325637091707Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit3e-57223
NC_014965:997344:1006320100632010080921773Vibrio vulnificus MO6-24/O chromosome I, complete sequencetype I restriction-modification system, DNA-methyltransferase subunit M3e-56220
NC_010995:764567:7715967715967739832388Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, S subunit9e-56218
NC_011899:2165814:2178735217873521804321698Halothermothrix orenii H 168, complete genomerestriction modification system DNA specificity domain protein2e-55216
NC_009925:2240871:2242037224203722437581722Acaryochloris marina MBIC11017, complete genometype I restriction-modification system S subunit7e-55215
NC_015633:2801321:2804068280406828058431776Vibrio anguillarum 775 chromosome chromosome I, complete sequencetype I restriction-modification system specificity4e-54213
NC_015677:1282865:1291978129197812937441767Ramlibacter tataouinensis TTB310 chromosome, complete genometype I restriction- modification, DNA specificity subunit2e-53210
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain9e-49195
NC_015711:8852850:8861468886146888629851518Myxococcus fulvus HW-1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-45182
NC_014034:1418681:1425744142574414274261683Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit S4e-43176
NC_010814:1441327:1458977145897714603201344Geobacter lovleyi SZ, complete genomerestriction modification system DNA specificity domain1e-39164
NC_011884:1029328:1038008103800810397261719Cyanothece sp. PCC 7425, complete genomerestriction modification system DNA specificity domain protein2e-34147
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-34147
NC_014727:368698:3798813798813812961416Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type i site-specific deoxyribonuclease chain s4e-33143
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-31138
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit5e-31136
NC_015873:63487:6196561965634941530Megasphaera elsdenii DSM 20460, complete genomerestriction modification system DNA specificity domain protein6e-30132
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF453e-27123
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein8e-26119
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein8e-26119
NC_014363:1902868:1910148191014819115841437Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-26119
NC_014655:130636:1415751415751430621488Leadbetterella byssophila DSM 17132 chromosome, complete genomerestriction modification system DNA specificity domain2e-25117
NC_015571:2002489:2035156203515620365861431Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system3e-25117
NC_013730:3729626:3747015374701537485771563Spirosoma linguale DSM 74, complete genomerestriction modification system DNA specificity domain protein2e-23111
NC_015571:2002489:2036581203658120381431563Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system, subunit S4e-23109
NC_018748:1443176:1444217144421714455061290Emticicia oligotrophica DSM 17448 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-21104
NC_015850:1155376:1165221116522111689823762Acidithiobacillus caldus SM-1 chromosome, complete genomerestriction-modification protein4e-21103
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain8e-21102
NC_016610:2077603:2094664209466420960731410Tannerella forsythia ATCC 43037 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein2e-20101
NC_011979:3112911:3123744312374431256781935Geobacter sp. FRC-32, complete genomeRestriction endonuclease S subunit-like protein1e-1998.6
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit2e-1894.4
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-1893.2
NC_015634:3017564:3034052303405230353621311Bacillus coagulans 2-6 chromosome, complete genomeputative type I restriction modification system, specificity protein2e-1790.9
NC_014934:3786132:3798582379858237997571176Cellulophaga algicola DSM 14237 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1689
NC_003228:1732497:1732497173249717338401344Bacteroides fragilis NCTC 9343, complete genomeputative type I restriction enzyme specificity protein1e-1688.6
NC_016147:2337244:2348124234812423492871164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1687.4
NC_013203:1351941:1375039137503913764181380Atopobium parvulum DSM 20469, complete genomehypothetical protein5e-1686.7
NC_009715:1470419:148190214819021482873972Campylobacter curvus 525.92 chromosome, complete genometype I restriction-modification system S subunit7e-1685.9
NC_011206:2369500:2383643238364323848991257Acidithiobacillus ferrooxidans ATCC 53993, complete genomerestriction modification system DNA specificity domain1e-1585.5
NC_009712:1008000:1014213101421310155861374Candidatus Methanoregula boonei 6A8, complete genomerestriction modification system DNA specificity subunit1e-1585.5
NC_011726:3051408:307105630710563071772717Cyanothece sp. PCC 8801, complete genomerestriction modification system DNA specificity domain protein2e-1584.3
NC_018528:697553:696817696817697560744Lactobacillus helveticus R0052 chromosome, complete genomerestriction modification system DNA specificity subunit5e-1583.2
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR6e-1582.8
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS6e-1582.8
NC_012917:3241196:3252422325242232535941173Pectobacterium carotovorum subsp. carotovorum PC1, complete genomerestriction modification system DNA specificity domain protein6e-1479.3
NC_007951:4608560:4610109461010946114251317Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative HsdS protein2e-1378.2
NC_011884:3099488:3118941311894131201791239Cyanothece sp. PCC 7425, complete genomerestriction modification system DNA specificity domain protein2e-1377.8
NC_011185:37922:4654046540478201281Vibrio fischeri MJ11 plasmid pMJ100, complete sequencerestriction modification system S subunit6e-1376.3
NC_009033:755226:7610247610247624151392Staphylothermus marinus F1, complete genomerestriction modification system DNA specificity domain5e-1376.3
NC_015696:285456:2951282951282962971170Francisella sp. TX077308 chromosome, complete genometype I restriction-modification system, specificity subunit S1e-1275.5
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit2e-1274.7
NC_014216:3003347:300606530060653006445381Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity subunit3e-1273.9
NC_016027:1902854:1926268192626819274581191Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA specificity S subunit4e-1273.6
NC_009328:814530:8393888393888409171530Geobacillus thermodenitrificans NG80-2 chromosome, complete genometype I specificity subunit HsdS5e-1273.2
NC_015259:734795:7492687492687504401173Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative Restriction modification system, type I hsdS9e-1272.4
NC_008009:4421992:4439377443937744406871311Acidobacteria bacterium Ellin345, complete genomerestriction modification system S subunit7e-1272.4
NC_011144:1073944:1085756108575610872191464Phenylobacterium zucineum HLK1, complete genometype I restriction-modification system, S subunit1e-1171.6
NC_015578:3495034:350381135038113504440630Treponema primitia ZAS-2 chromosome, complete genometype I site-specific deoxyribonuclease1e-1171.6
NC_015580:293803:2967442967442980541311Novosphingobium sp. PP1Y, complete genomeputative type I restriction-modification system specificity subunit2e-1171.6
NC_015844:3159046:3159046315904631604521407Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, S subunit7e-1169.3
NC_016610:2077603:2097765209776520989701206Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein7e-1169.3
NC_009434:695582:7172977172977187151419Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit9e-1168.9
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein9e-1168.9
NC_009052:4335754:4345846434584643471291284Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain2e-1068.2
NC_013716:3512950:3521977352197735235931617Citrobacter rodentium ICC168, complete genomeputative type I restriction modification system HsdS component2e-1067.8
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein2e-1067.8
NC_015125:1668780:1680807168080716819851179Microbacterium testaceum StLB037, complete genomerestriction endonuclease S subunits7e-1065.9
NC_009429:401500:422289422289422549261Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completeType I restriction-modification system methyltransferase subunit-like protein1e-0965.1
NC_014216:3003347:3007974300797430119703997Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein2e-0964.7
NC_011745:2209288:2218310221831022198751566Escherichia coli ED1a chromosome, complete genomeputative type I restriction modification system protein4e-0963.5
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein8e-0962.4
NC_011083:4547825:4598267459826745994091143Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,restriction modification system DNA specificity domain1e-0862
NC_010498:4856011:4859524485952448608101287Escherichia coli SMS-3-5, complete genometype I restriction modification DNA specificity domain-containing protein2e-0861.6
NC_007484:2045500:2045515204551520469661452Nitrosococcus oceani ATCC 19707, complete genomeRestriction modification system DNA specificity domain2e-0861.2
NC_012914:5446366:5451995545199554533651371Paenibacillus sp. JDR-2, complete genomerestriction modification system DNA specificity domain protein2e-0860.8
NC_015966:1661329:1673910167391016752501341Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0860.1
NC_015953:2349503:2376073237607323773111239Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0758.5
NC_018876:1061682:1092892109289210942621371Methanolobus psychrophilus R15 chromosome, complete genomehsdS2e-0758.2
NC_015588:939037:9494969494969507071212Isoptericola variabilis 225 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-0758.2
NC_015740:3631326:3647442364744236487821341Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completerestriction modification system DNA specificity domain-containing protein3e-0757.4
NC_014217:2760898:2785685278568527872051521Starkeya novella DSM 506 chromosome, complete genomeRestriction endonuclease S subunits-like protein1e-0655.5
NC_017161:1:1655416554178341281Hydrogenobacter thermophilus TK-6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0653.5
NC_013799:1:1649316493177731281Hydrogenobacter thermophilus TK-6, complete genomerestriction endonuclease S subunit4e-0653.5
NC_014970:530748:536830536830537417588Mycoplasma haemofelis str. Langford 1, complete genometype I restriction-modification system, S subunit8e-0652.4