Pre_GI: BLASTP Hits

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Query: NC_017265:2087487:2088684 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2088684, End: 2088923, Length: 240

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2013450:203273020327302032972243Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-30131
NC_004631:1091303:110916611091661109405240Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-24111
NC_003198:1867456:187172718717271871966240Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-24111
NC_006905:1961774:196608119660811966320240Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-24111
NC_011080:1944226:194849719484971948736240Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-24111
NC_011094:1923870:192814019281401928379240Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-24111
NC_016832:1090274:110813811081381108377240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-24111
NC_003197:1945858:195012919501291950368240Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-24110
NC_011149:1236689:125026412502641250503240Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-24110
NC_011205:1391971:141733614173361417575240Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-24110
NC_016810:1903426:190769719076971907936240Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-24110
NC_016831:1690811:169507616950761695315240Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-24110
NC_016856:1957263:196153419615341961773240Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-24110
NC_016857:1903426:190769719076971907936240Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein2e-24110
NC_016860:1943203:194747419474741947713240Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-24110
NC_016863:1905454:190972519097251909964240Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-24110
NC_017046:1902788:190705919070591907298240Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-24110
NC_011083:1993672:199793719979371998176240Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-24110