Pre_GI: BLASTP Hits

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Query: NC_016944:238580:261725 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 261725, End: 261931, Length: 207

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015633:413587:435640435640435852213Vibrio anguillarum 775 chromosome chromosome I, complete sequencetransposase2e-28124
NC_006370:1810842:181480018148001815354555Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein7e-1165.9
NC_012912:3853377:3869001386900138701341134Dickeya zeae Ech1591, complete genometransposase IS4 family protein9e-1062.4
NC_012912:3853377:3865595386559538667281134Dickeya zeae Ech1591, complete genometransposase IS4 family protein9e-1062.4
NC_011026:1681852:1700500170050017016361137Chloroherpeton thalassium ATCC 35110, complete genometransposase IS4 family protein1e-0962
NC_011026:2269986:2296107229610722972431137Chloroherpeton thalassium ATCC 35110, complete genometransposase IS4 family protein1e-0962
NC_008312:5308927:531401253140125314203192Trichodesmium erythraeum IMS101, complete genomeH repeat-associated protein-like1e-0962
NC_008786:3323167:334218933421893342533345Verminephrobacter eiseniae EF01-2, complete genomeH repeat-associated protein-like protein3e-0960.8
NC_011741:256932:268579268579269544966Escherichia coli IAI1 chromosome, complete genomeputative transposase1e-0858.5
CU928160:256932:268579268579269544966Escherichia coli IAI1 chromosome, complete genomeputative transposase1e-0858.5
NC_007384:1763375:177514317751431776138996Shigella sonnei Ss046, complete genomeH-repeat-associated protein-like protein2e-0857.8
NC_019892:5171629:5179336517933651804631128Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase2e-0857.8
NC_007384:278810:286237286237287094858Shigella sonnei Ss046, complete genomeputative receptor protein2e-0857.8
NC_016822:267758:283822283822284679858Shigella sonnei 53G, complete genomereceptor protein2e-0857.8
NC_011741:256932:2767662767662778271062Escherichia coli IAI1 chromosome, complete genomeputative transposase3e-0857.4
AC_000091:3995233:4014901401490140160371137Escherichia coli W3110 DNA, complete genomepredicted transposase3e-0857.4
NC_010468:3209326:3217156321715632182921137Escherichia coli ATCC 8739, complete genometransposase IS4 family protein3e-0857.4
CU928160:256932:2767662767662778271062Escherichia coli IAI1 chromosome, complete genomeputative transposase3e-0857.4
NC_016822:267758:2872402872402883761137Shigella sonnei 53G, complete genomereceptor3e-0857.4
NC_007384:278810:2883882883882895241137Shigella sonnei Ss046, complete genomeputative receptor3e-0857.4
NC_016822:1839739:184063918406391841373735Shigella sonnei 53G, complete genomehypothetical protein3e-0857.4
NC_007384:1763375:176265317626531763387735Shigella sonnei Ss046, complete genomehypothetical protein3e-0857.4
NC_016822:1839739:185391018539101854905996Shigella sonnei 53G, complete genomeH repeat-containing protein3e-0857.4
NC_011415:644811:6660146660146671501137Escherichia coli SE11 chromosome, complete genomeH repeat-associated protein3e-0857.4
NC_011751:680417:7012057012057023411137Escherichia coli UMN026 chromosome, complete genomeputative transposase3e-0857.4
NC_016822:1839739:1841914184191418430501137Shigella sonnei 53G, complete genomereceptor3e-0857.4
NC_007384:1763375:1763928176392817650641137Shigella sonnei Ss046, complete genomeputative receptor3e-0857.4
NC_011751:1714131:172492717249271725415489Escherichia coli UMN026 chromosome, complete genome3e-0857.4
NC_012947:248000:2849742849742861101137Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetransposase IS4 family protein3e-0857.4
NC_012967:3549880:3555066355506635562021137Escherichia coli B str. REL606 chromosome, complete genomeputative transposase3e-0857.4
NC_011415:2346474:2367226236722623683621137Escherichia coli SE11 chromosome, complete genomeH repeat-associated protein2e-0857.4
NC_012759:1409086:1421899142189914230351137Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-0857.4
NC_000913:1517051:1529840152984015309761137Escherichia coli K12, complete genomehypothetical protein2e-0857.4
NC_010473:1607646:1620435162043516215711137Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-0857.4
AC_000091:1521976:1533530153353015346661137Escherichia coli W3110 DNA, complete genomehypothetical protein2e-0857.4
NC_013353:604719:6257776257776269131137Escherichia coli O103:H2 str. 12009, complete genomeH repeat-associated protein2e-0857.4
AP010958:604719:6257776257776269131137Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative H repeat-associated protein2e-0857.4
NC_013941:261094:2751242751242762601137Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISEc3, transposase2e-0857.4
NC_013008:261226:2752132752132763491137Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase2e-0857.4
NC_002655:261236:2726532726532737891137Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-0857.4
NC_002695:261235:2726522726522737881137Escherichia coli O157:H7 str. Sakai, complete genomeH repeat-associated protein2e-0857.4
NC_013361:649518:6696096696096707451137Escherichia coli O26:H11 str. 11368 chromosome, complete genomeH repeat-associated protein2e-0857.4
NC_011751:256830:2715242715242726601137Escherichia coli UMN026 chromosome, complete genomeputative transposase2e-0857.4
NC_010468:2406387:2422154242215424232901137Escherichia coli ATCC 8739, complete genometransposase IS4 family protein2e-0857.4
NC_011353:261220:2752132752132763491137Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISEc3, transposase2e-0857.4
NC_013941:733286:7540237540237551591137Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISEc4, transposase8e-0855.8
NC_014228:1712339:172702917270291727886858Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-0753.1
NC_007954:1324062:1348575134857513496991125Shewanella denitrificans OS217, complete genometransposase, IS48e-0752.4
NC_014844:3538432:3550829355082935519471119Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS4 family protein8e-0752.4
NC_011740:1494796:150614215061421506798657Escherichia fergusonii ATCC 35469, complete genome3e-0650.8
NC_006513:38818:4516945169462931125Azoarcus sp. EbN1, complete genometransposase (IS4)3e-0650.4
NC_006513:38818:5166351663527871125Azoarcus sp. EbN1, complete genometransposase (IS4)3e-0650.4
NC_006513:38818:4278842788438941107Azoarcus sp. EbN1, complete genometransposase (IS4)3e-0650.4
NC_018012:1789028:1797399179739917985831185Thiocystis violascens DSM 198 chromosome, complete genometransposase5e-0650.1
NC_018012:3300000:3303912330391233050961185Thiocystis violascens DSM 198 chromosome, complete genometransposase5e-0650.1
NC_018012:4054000:4064606406460640657901185Thiocystis violascens DSM 198 chromosome, complete genometransposase5e-0650.1
NC_018012:4221612:4231929423192942331131185Thiocystis violascens DSM 198 chromosome, complete genometransposase5e-0650.1
NC_018012:598724:6243626243626255461185Thiocystis violascens DSM 198 chromosome, complete genometransposase5e-0650.1
NC_006513:2526843:254790225479022548180279Azoarcus sp. EbN1, complete genomeputative transposase (IS4, fragment)6e-0649.7