Pre_GI: BLASTP Hits

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Query: NC_016944:168530:186479 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 186479, End: 188167, Length: 1689

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:2611749261174926134371689Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein01157
NC_012668:442601:4508174508174525051689Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01157
NC_012667:703852:7123887123887140761689Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein01157
NC_002505:168532:1864811864811881691689Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein01157
NC_015633:338000:3491673491673505551389Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein0861
NC_011663:5016488:5023674502367450254161743Shewanella baltica OS223 chromosome, complete genomehypothetical protein4e-70266
NC_016901:5130147:5136938513693851386921755Shewanella baltica OS678 chromosome, complete genomehypothetical protein3e-62239
NC_009665:5072413:5079189507918950809431755Shewanella baltica OS185 chromosome, complete genomehypothetical protein3e-62239
NC_009997:5188221:5196781519678151980701290Shewanella baltica OS195, complete genomehypothetical protein3e-53209
NC_014541:1753776:1768384176838417702071824Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein3e-1997.1
NC_006856:95830:1030281030281048781851Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-1067.4
NC_015633:2919501:2931174293117429330181845Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-0655.1
NC_018678:554675:5624815624815643281848Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein2e-0654.3
NC_012668:2258854:2266253226625322680971845Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-0653.9
NC_012668:1688500:1749085174908517509291845Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-0653.9
NC_012668:1623350:1629482162948216313261845Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-0653.9
NC_012668:160357:1811451811451829891845Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-0653.9