Pre_GI: BLASTP Hits

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Query: NC_016846:24500:39381 Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,

Start: 39381, End: 39650, Length: 270

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011749:34056:521805218052440261Escherichia coli UMN026 plasmid p1ESCUM, complete sequencereplication protein8e-1992.4
NC_010660:175200:192565192565192825261Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencereplication regulatory protein RepA22e-1374.3
NC_007607:87000:106454106454106714261Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceRepB2e-1374.3
NC_007608:97092:111757111757112017261Shigella boydii Sb227 plasmid pSB4_227, complete sequenceRepB2e-1374.3
NC_004851:191709:208897208897209157261Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceRepB, replication protein2e-1374.3
NC_017319:192482:208849208849209040192Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceRepB protein3e-0753.9