Pre_GI: BLASTP Hits

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Query: NC_015848:483500:508669 Mycobacterium canettii CIPT 140010059, complete genome

Start: 508669, End: 509988, Length: 1320

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016804:477500:4994494994495007681320Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein0756
NC_019950:481881:5046885046885060071320Mycobacterium canettii CIPT 140060008 complete genomeConserved membrane protein of unknown function0756
NC_009565:479500:5014705014705027891320Mycobacterium tuberculosis F11, complete genomehypothetical protein0756
NC_012207:477500:4994484994485007671320Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein0756
NC_002945:476835:4993194993195006381320Mycobacterium bovis AF2122/97, complete genomehypothetical protein0756
NC_008769:507000:5291155291155304341320Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein0756
NC_012943:476500:4985594985594998781320Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein0756
NC_016768:476500:4985594985594998781320Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein0756
NC_000962:475816:4983004983004996191320Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE CONSERVED MEMBRANE PROTEIN0752
NC_009525:477093:4996104996105009291320Mycobacterium tuberculosis H37Ra, complete genomeputative conserved membrane protein0752
NC_010612:835648:8616808616808629991320Mycobacterium marinum M, complete genomehypothetical protein0677
NC_011896:363448:3843503843503856661317Mycobacterium leprae Br4923, complete genome1e-164580
NC_017186:361444:3614443614443628621419Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein3e-30133