Pre_GI: BLASTP Hits

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Query: NC_015848:483500:483968 Mycobacterium canettii CIPT 140010059, complete genome

Start: 483968, End: 484609, Length: 642

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:481881:483017483017483658642Mycobacterium canettii CIPT 140060008 complete genomeConserved secreted protein of unknown function5e-93340
NC_008769:507000:507494507494508135642Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative secreted protein2e-92338
NC_012207:477500:477827477827478468642Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative secreted protein2e-92338
NC_002755:472872:476770476770477411642Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein2e-92338
NC_009525:477093:477989477989478630642Mycobacterium tuberculosis H37Ra, complete genomeputative secreted protein2e-92338
NC_009565:479500:479849479849480490642Mycobacterium tuberculosis F11, complete genomehypothetical secreted protein2e-92338
NC_000962:475816:476679476679477320642Mycobacterium tuberculosis H37Rv, complete genomePOSSIBLE SECRETED PROTEIN2e-92338
NC_012943:476500:476938476938477579642Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-92338
NC_016768:476500:476938476938477579642Mycobacterium tuberculosis KZN 4207 chromosome, complete genomesecreted protein2e-92338
NC_016804:477500:477828477828478469642Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein2e-92338
NC_017026:476500:476979476979477620642Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein2e-92338
NC_002945:476835:477698477698478339642Mycobacterium bovis AF2122/97, complete genomehypothetical protein2e-92338