Pre_GI: BLASTP Hits

Some Help

Query: NC_015848:3851230:3858096 Mycobacterium canettii CIPT 140010059, complete genome

Start: 3858096, End: 3858344, Length: 249

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:3818000:382084538208453821735891Mycobacterium canettii CIPT 140060008 complete genomeEnoyl-CoA hydratase EchA184e-40163
NC_008769:3769065:377529037752903776180891Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative enoyl-CoA hydratase echA186e-40162
NC_012207:3766978:377320337732033774093891Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative enoyl-CoA hydratase6e-40162
NC_016804:3753243:375465537546553755545891Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative enoyl-CoA hydratase6e-40162
NC_009565:3793976:380084338008433801091249Mycobacterium tuberculosis F11, complete genomeenoyl-CoA hydratase echA18.15e-40162
NC_009525:3794000:379749137974913797739249Mycobacterium tuberculosis H37Ra, complete genomeenoyl-CoA hydratase EchA18.15e-40162
NC_000962:3781501:378836837883683788616249Mycobacterium tuberculosis H37Rv, complete genomePROBABLE ENOYL-CoA HYDRATASE (FRAGMENT) ECHA18.1 (ENOYL HYDRASE) (UNSATURATED ACYL-CoA HYDRATASE) (CROTONASE)5e-40162
NC_012943:3777371:378423837842383784486249Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeenoyl-CoA hydratase echA18_15e-40162
NC_016768:3774105:378097237809723781220249Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeenoyl-CoA hydratase echA18_15e-40162
NC_017026:3754000:375761937576193757867249Mycobacterium tuberculosis RGTB327 chromosome, complete genomeenoyl-CoA hydratase5e-40162
NC_002945:3735141:374136637413663742256891Mycobacterium bovis AF2122/97, complete genomeenoyl-CoA hydratase6e-40162