Pre_GI: BLASTP Hits

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Query: NC_015848:2859145:2875339 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2875339, End: 2876091, Length: 753

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:2830682:284687628468762847628753Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein6e-148523
NC_016804:2735897:275043927504392751191753Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein3e-146517
NC_002945:2757821:277407527740752774827753Mycobacterium bovis AF2122/97, complete genomehypothetical protein3e-146517
NC_008769:2754828:277107427710742771826753Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein3e-146517
NC_012207:2747599:276384727638472764599753Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein3e-146517
NC_009565:2806000:282059628205962821348753Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-145514
NC_000962:2791019:280727828072782808030753Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein2e-145514
NC_009525:2802987:281924628192462819998753Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein2e-145514
NC_017026:2786000:280091128009112801663753Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein2e-145514
NC_002755:2788000:280276628027662803518753Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein2e-145514