Pre_GI: BLASTP Hits

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Query: NC_015848:2859145:2874726 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2874726, End: 2875349, Length: 624

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:2830682:284626328462632846886624Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein2e-117421
NC_012207:2747599:276323427632342763857624Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein7e-117419
NC_002755:2788000:280215328021532802776624Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein7e-117419
NC_008769:2754828:277046127704612771084624Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein7e-117419
NC_009525:2802987:281863328186332819256624Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein7e-117419
NC_002945:2757821:277346227734622774085624Mycobacterium bovis AF2122/97, complete genomehypothetical protein7e-117419
NC_000962:2791019:280666528066652807288624Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein7e-117419
NC_009565:2806000:281998328199832820606624Mycobacterium tuberculosis F11, complete genomehypothetical protein7e-117419
NC_016804:2735897:274982627498262750449624Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein7e-117419
NC_017026:2786000:280029828002982800921624Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein7e-117419
NC_016584:3617439:363985936398593640395537Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein7e-1890.5
NC_015681:1201926:121619212161921216671480Thermodesulfatator indicus DSM 15286 chromosome, complete genomehypothetical protein9e-1786.7
NC_003552:3092456:311383631138363114345510Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-1581.3
NC_020389:3106847:312501431250143125484471Methanosarcina mazei Tuc01, complete genomehypothetical protein3e-1478.2
NC_018870:2316499:231942623194262319938513Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein5e-1270.9
NC_007948:4558000:459129145912914591797507Polaromonas sp. JS666, complete genomelysine decarboxylase family protein2e-1065.9
NC_016629:3308329:334331733433173343784468Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein2e-0962.8
NC_008312:2349500:236189623618962362381486Trichodesmium erythraeum IMS101, complete genomeP450 cytochrome, putative3e-0962
NC_008554:3055000:305895930589593059435477Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein4e-0961.2
NC_014718:791528:799889799889800458570Burkholderia rhizoxinica HKI 454 chromosome, complete genomehypothetical protein1e-0860.1
NC_006177:2883476:288646328864632887047585Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein1e-0860.1
NC_015672:2236000:225650522565052256963459Flexistipes sinusarabici DSM 4947 chromosome, complete genomehypothetical protein1e-0859.7
NC_009828:1530732:153950415395041540028525Thermotoga lettingae TMO, complete genomehypothetical protein2e-0755.8
NC_013960:2166367:217875421787542179461708Nitrosococcus halophilus Nc4 chromosome, complete genomehypothetical protein6e-0650.8
NC_007777:4597379:460160346016034602379777Frankia sp. CcI3, complete genomeconserved hypothetical protein 7308e-0650.4