Pre_GI: BLASTP Hits

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Query: NC_015761:2227500:2241938 Salmonella bongori NCTC 12419, complete genome

Start: 2241938, End: 2242429, Length: 492

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:632683:636715636715637230516Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-86316
NC_003197:2327474:235915423591542359645492Salmonella typhimurium LT2, complete genomeelectron transfer protein4e-84310
NC_016810:2325190:235687023568702357361492Salmonella enterica subsp. enterica serovar Typhimurium strferredoxin-type protein NapF4e-84310
NC_016856:2379027:241070724107072411198492Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sferredoxin-type protein4e-84310
NC_016857:2325190:235687023568702357361492Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74ferredoxin-type protein4e-84310
NC_016860:2323017:235469723546972355188492Salmonella enterica subsp. enterica serovar Typhimurium strferredoxin-type protein4e-84310
NC_016863:2324293:235889923588992359390492Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ferredoxin-type protein4e-84310
NC_011294:2334979:235324923532492353740492Salmonella enterica subsp. enterica serovar Enteritidis strferredoxin-type protein2e-84310
NC_016831:687549:690283690283690774492Salmonella enterica subsp. enterica serovar Gallinarum/pullorumferredoxin-type protein NapF2e-84310
NC_011094:2348491:236493223649322365423492Salmonella enterica subsp. enterica serovar Schwarzengrund strferredoxin-type protein2e-84310
NC_011274:2325840:234411823441182344609492Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91ferredoxin-type protein5e-84309
NC_012125:1517925:152068515206851521176492Salmonella enterica subsp. enterica serovar Paratyphi C strainferredoxin-type protein7e-84308
NC_006511:682863:685623685623686114492Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCferredoxin-type protein NapF2e-83307
NC_011080:2342672:236092623609262361417492Salmonella enterica subsp. enterica serovar Newport str. SL254,ferredoxin-type protein NapF2e-83307
NC_011149:2294500:231063723106372311128492Salmonella enterica subsp. enterica serovar Agona str. SL483,ferredoxin-type protein NapF2e-83307
NC_011147:682897:685657685657686148492Salmonella enterica subsp. enterica serovar Paratyphi A strferredoxin-type protein2e-83307
NC_011205:2462025:248031624803162480807492Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ferredoxin-type protein2e-83307
NC_010102:683444:686178686178686669492Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-83306
NC_003198:2297837:231610523161052316596492Salmonella enterica subsp. enterica serovar Typhi str. CT18,ferredoxin-type protein NapF4e-82303
NC_004631:685357:688117688117688608492Salmonella enterica subsp. enterica serovar Typhi Ty2, completeferredoxin-type protein NapF3e-82303
NC_016832:687000:688071688071688562492Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-82303
NC_006155:3237990:326244632624463262949504Yersinia pseudotuberculosis IP 32953, complete genomeferredoxin-type protein NapF2e-41167
NC_010634:3155741:317995731799573180460504Yersinia pseudotuberculosis PB1/+, complete genomeferredoxin-type protein NapF2e-41167
NC_014837:3126543:314440831444083144881474Pantoea sp. At-9b chromosome, complete genomeferredoxin-type protein NapF7e-31132
NC_011083:2375061:240673424067342406871138Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ferredoxin-type protein NapF5e-1890.1
NC_017046:2324554:235623423562342356371138Salmonella enterica subsp. enterica serovar Typhimurium str. 798ferredoxin-type protein NapF5e-1890.1
NC_015387:1803938:180737618073761807846471Marinithermus hydrothermalis DSM 14884 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein8e-1682.8
NC_017187:325229:334461334461334937477Arcobacter butzleri ED-1, complete genomeferredoxin-type protein NapF3e-1270.9
NC_017047:1551836:155337115533711553943573Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-0962.8
NC_015061:1598920:160045516004551601027573Rahnella sp. Y9602 chromosome, complete genomehypothetical protein1e-0962.8
NC_016818:1605918:160745316074531608025573Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeferredoxin-type protein NapF4e-0960.8
NC_015636:832224:8392688392688404281161Methanothermococcus okinawensis IH1 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein2e-0755.1
NC_009635:94937:1028641028641040151152Methanococcus aeolicus Nankai-3 chromosome, complete genome4Fe-4S ferredoxin4e-0753.9
NC_013173:1259898:1274599127459912761581560Desulfomicrobium baculatum DSM 4028, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein6e-0753.5
NC_015636:175660:183340183340183942603Methanothermococcus okinawensis IH1 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein7e-0753.1
NC_002939:360462:388985388985389410426Geobacter sulfurreducens PCA, complete genomeiron-sulfur cluster-binding protein2e-0652
NC_009614:821247:8246618246618261871527Bacteroides vulgatus ATCC 8482 chromosome, complete genomeferredoxin-type protein2e-0652
NC_007947:577315:577315577315578019705Methylobacillus flagellatus KT, complete genomeMauM/NapG family ferredoxin-type protein3e-0651.2
NC_011769:3434744:3434744343474434367141971Desulfovibrio vulgaris str. 'Miyazaki F', complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0650.8
NC_015562:899030:9373779373779385821206Methanotorris igneus Kol 5 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein3e-0650.8
NC_012808:2886282:290222429022242902886663Methylobacterium extorquens AM1, complete genomeMauM, putative ferredoxin-type protein essential for electron transfer3e-0650.8