Pre_GI: BLASTP Hits

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Query: NC_015744:900000:900255 Chlamydia trachomatis L2c chromosome, complete genome

Start: 900255, End: 901121, Length: 867

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain was isolated from a man with severe proctitis. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010287:899945:900786900786901652867Chlamydia trachomatis 434/Bu, complete genomehypothetical protein7e-128456
NC_010280:899974:900815900815901681867Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomehypothetical protein7e-128456
NC_017436:581986:582188582188583054867Chlamydia trachomatis D-LC chromosome, complete genomehypothetical protein5e-125447
NC_017434:581988:582190582190583056867Chlamydia trachomatis D-EC chromosome, complete genomehypothetical protein5e-125447
NC_017430:582000:582007582007582873867Chlamydia trachomatis G/11222 chromosome, complete genomehypothetical protein5e-125447
NC_000117:581987:582189582189583055867Chlamydia trachomatis D/UW-3/CX, complete genomehypothetical protein5e-125447
NC_015408:404778:424031424031424867837Chlamydophila pecorum E58 chromosome, complete genomehypothetical protein4e-63241
NC_015713:2193610:219361021936102194362753Simkania negevensis Z chromosome gsn.131, complete genomehypothetical protein3e-2099