Pre_GI Gene

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Host: NC_010287 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010287:899945 Chlamydia trachomatis 434/Bu, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This is a biovar, serovar L2 strain. Serovar L2 strains are associated with sexually transmitted infections. L2 strains cause lymphogranuloma vernerum, a systemic infection which infects monocytes and spreads to lymph nodes causing swelling. Causes disease in either the eye or the urogenital tract. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
899945900394450hypothetical proteinBLASTP
900786901652867hypothetical proteinBLASTP
9016639026671005glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
902711903136426LSU ribosomal protein L17PQuickGO ontologyBLASTP
9031459042781134DNA-directed RNA polymerase alpha chainQuickGO ontologyBLASTP
904299904697399SSU ribosomal protein S11PQuickGO ontologyBLASTP
904719905087369SSU ribosomal protein S13PQuickGO ontologyBLASTP
9051439065161374protein translocase subunitQuickGO ontologyBLASTP
906539906973435LSU ribosomal protein L15PQuickGO ontologyBLASTP
906966907463498SSU ribosomal protein S5PQuickGO ontologyBLASTP
907478907849372LSU ribosomal protein L18PQuickGO ontologyBLASTP
907871908422552LSU ribosomal protein L6PQuickGO ontologyBLASTP
908450908851402SSU ribosomal protein S8PQuickGO ontologyBLASTP
908869909411543LSU ribosomal protein L5PQuickGO ontologyBLASTP
909413909748336LSU ribosomal protein L24PQuickGO ontologyBLASTP
909761910129369LSU ribosomal protein L14PQuickGO ontologyBLASTP
910146910397252SSU ribosomal protein S17PQuickGO ontologyBLASTP
910390910608219LSU ribosomal protein L29PQuickGO ontologyBLASTP
910610911026417LSU ribosomal protein L16PQuickGO ontologyBLASTP
911059911733675SSU ribosomal protein S3PQuickGO ontologyBLASTP
911743912078336LSU ribosomal protein L22PQuickGO ontologyBLASTP
912097912363267SSU ribosomal protein S19PQuickGO ontologyBLASTP
912369913223855LSU ribosomal protein L2PQuickGO ontologyBLASTP
913247913582336LSU ribosomal protein L23PQuickGO ontologyBLASTP
913598914266669LSU ribosomal protein L1EQuickGO ontologyBLASTP
914275914940666LSU ribosomal protein L3PQuickGO ontologyBLASTP
915375916271897hypothetical proteinBLASTP
916437917387951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
917377918219843acyl-acyl-carrier-protein--UDP-N-acetylglucos amine O-acyltransferaseQuickGO ontologyBLASTP
9182319186924623R-hydroxymyristoyl-acyl carrier protein dehydrataseQuickGO ontologyBLASTP
918689919549861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
9196499212771629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
921341921823483acyl-CoA hydrolaseQuickGO ontologyBLASTP
921959922711753DNA polymerase III epsilon chainQuickGO ontologyBLASTP