Pre_GI Gene

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Host: NC_017434 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017434:581988 Chlamydia trachomatis D-EC chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
582190583056867hypothetical proteinBLASTP
5830675840711005Glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
58411558454042650S ribosomal protein L17QuickGO ontologyBLASTP
5845495857331185DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58570358610139930S ribosomal protein S11QuickGO ontologyBLASTP
58612358649136930S ribosomal protein S13QuickGO ontologyBLASTP
5865475879201374Protein translocase subunitQuickGO ontologyBLASTP
58794358837743550S ribosomal protein L15QuickGO ontologyBLASTP
58837058886749830S ribosomal protein S5QuickGO ontologyBLASTP
58888258925337250S ribosomal protein L18QuickGO ontologyBLASTP
58927558982655250S ribosomal protein L6QuickGO ontologyBLASTP
58985459025540230S ribosomal protein S8QuickGO ontologyBLASTP
59027359081554350S ribosomal protein L5QuickGO ontologyBLASTP
59081759115233650S ribosomal protein L24QuickGO ontologyBLASTP
59116559153336950S ribosomal protein L14QuickGO ontologyBLASTP
59155059180125230S ribosomal protein S17QuickGO ontologyBLASTP
59179459203924650S ribosomal protein L29QuickGO ontologyBLASTP
59201459243041750S ribosomal protein L16QuickGO ontologyBLASTP
59246359313767530S ribosomal protein S3QuickGO ontologyBLASTP
59314759348233650S ribosomal protein L22QuickGO ontologyBLASTP
59350159376726730S ribosomal protein S19QuickGO ontologyBLASTP
59377359462785550S ribosomal protein L2QuickGO ontologyBLASTP
59465159498633650S ribosomal protein L23QuickGO ontologyBLASTP
59500259569769650S ribosomal protein L1E L4PQuickGO ontologyBLASTP
59567959634466650S ribosomal protein L3QuickGO ontologyBLASTP
596779597681903hypothetical proteinBLASTP
597841598791951Methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
598781599623843Acyl-acyl-carrier-protein--UDP-N- acetylglucosamine O-acyltransferaseQuickGO ontologyBLASTP
5996356000964623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
600093600968876UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6010546026821629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
602746603228483acyl-CoA hydrolaseQuickGO ontologyBLASTP
603364604116753Exonuclease family proteinQuickGO ontologyBLASTP