Pre_GI Gene

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Host: NC_010280 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010280:899974 Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain is a variant of the L2 serovar. Serovar L2 strains are associated with sexually transmitted infections and cause lymphogranuloma vernerum, a systemic infection involving the lymph nodes. Chlamydia trachomatis L2b/UCH-1/proctitis was isolated from a recent outbreak of proctitis in Europe. Causes disease in either the eye or the urogenital tract. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
899974900423450hypothetical proteinBLASTP
900815901681867hypothetical proteinBLASTP
9016929026961005glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
902740903165426LSU ribosomal protein L17PQuickGO ontologyBLASTP
9031749043071134DNA-directed RNA polymerase alpha chainQuickGO ontologyBLASTP
904328904726399SSU ribosomal protein S11PQuickGO ontologyBLASTP
904748905116369SSU ribosomal protein S13PQuickGO ontologyBLASTP
9051729065451374protein translocase subunitQuickGO ontologyBLASTP
906568907002435LSU ribosomal protein L15PQuickGO ontologyBLASTP
906995907492498SSU ribosomal protein S5PQuickGO ontologyBLASTP
907507907878372LSU ribosomal protein L18PQuickGO ontologyBLASTP
907900908451552LSU ribosomal protein L6PQuickGO ontologyBLASTP
908479908880402SSU ribosomal protein S8PQuickGO ontologyBLASTP
908898909440543LSU ribosomal protein L5PQuickGO ontologyBLASTP
909442909777336LSU ribosomal protein L24PQuickGO ontologyBLASTP
909790910158369LSU ribosomal protein L14PQuickGO ontologyBLASTP
910175910426252SSU ribosomal protein S17PQuickGO ontologyBLASTP
910419910637219LSU ribosomal protein L29PQuickGO ontologyBLASTP
910639911055417LSU ribosomal protein L16PQuickGO ontologyBLASTP
911088911762675SSU ribosomal protein S3PQuickGO ontologyBLASTP
911772912107336LSU ribosomal protein L22PQuickGO ontologyBLASTP
912126912392267SSU ribosomal protein S19PQuickGO ontologyBLASTP
912398913252855LSU ribosomal protein L2PQuickGO ontologyBLASTP
913276913611336LSU ribosomal protein L23PQuickGO ontologyBLASTP
913627914295669LSU ribosomal protein L1EQuickGO ontologyBLASTP
914304914969666LSU ribosomal protein L3PQuickGO ontologyBLASTP
915404916300897hypothetical proteinBLASTP
916466917416951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
917406918248843acyl-acyl-carrier-protein--UDP-N-acetylglucos amine O-acyltransferaseQuickGO ontologyBLASTP
9182609187214623R-hydroxymyristoyl-acyl carrier protein dehydrataseQuickGO ontologyBLASTP
918718919578861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
9196779213051629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
921369921851483acyl-CoA hydrolaseQuickGO ontologyBLASTP
921987922739753DNA polymerase III epsilon chainQuickGO ontologyBLASTP