Pre_GI Gene

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Host: NC_000117 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000117:581987 Chlamydia trachomatis D/UW-3/CX, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Isolated from the cervix of an asymptomatic female. Opportunistic pathogen. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. This is a trachoma biovar, serovar D strain.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58198758206983tRNA-LeuQuickGO ontology
582189583055867hypothetical proteinBLASTP
5830665840701005glyceraldehyde-3-phosphate dehydrogenaseQuickGO ontologyBLASTP
58411458453942650S ribosomal protein L17QuickGO ontologyBLASTP
5845485856811134DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
58570258610039930S ribosomal protein S11QuickGO ontologyBLASTP
58612258649036930S ribosomal protein S13QuickGO ontologyBLASTP
5865465879191374preprotein translocase SecYQuickGO ontologyBLASTP
58794258837643550S ribosomal protein L15QuickGO ontologyBLASTP
58836958886649830S ribosomal protein S5QuickGO ontologyBLASTP
58888158925237250S ribosomal protein L18QuickGO ontologyBLASTP
58927458982555250S ribosomal protein L6QuickGO ontologyBLASTP
58985359025440230S ribosomal protein S8QuickGO ontologyBLASTP
59027259081454350S ribosomal protein L5QuickGO ontologyBLASTP
59081659115133650S ribosomal protein L24QuickGO ontologyBLASTP
59116459153236950S ribosomal protein L14QuickGO ontologyBLASTP
59154959180025230S ribosomal protein S17QuickGO ontologyBLASTP
59179359201121950S ribosomal protein L29QuickGO ontologyBLASTP
59201359242941750S ribosomal protein L16QuickGO ontologyBLASTP
59246259313667530S ribosomal protein S3QuickGO ontologyBLASTP
59314659348133650S ribosomal protein L22QuickGO ontologyBLASTP
59350059376626730S ribosomal protein S19QuickGO ontologyBLASTP
59377259462685550S ribosomal protein L2QuickGO ontologyBLASTP
59465059498533650S ribosomal protein L23QuickGO ontologyBLASTP
59500159566966950S ribosomal protein L4QuickGO ontologyBLASTP
59567859634366650S ribosomal protein L3QuickGO ontologyBLASTP
596778597674897hypothetical proteinBLASTP
597840598790951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
598780599622843UDP-N-acetylglucosamine acyltransferaseQuickGO ontologyBLASTP
5996346000954623R-hydroxymyristoyl ACP dehydrataseQuickGO ontologyBLASTP
600092600952861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6010536026811629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
602745603227483Acyl-CoA Thioester HydrolaseQuickGO ontologyBLASTP
603363604115753DNA polymerase III subunit epsilonQuickGO ontologyBLASTP