Pre_GI Gene

Some Help

Host: NC_017430 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017430:582000 Chlamydia trachomatis G/11222 chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
582007582873867hypothetical proteinBLASTP
5828845838881005glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
58393258435742650S ribosomal protein L17QuickGO ontologyBLASTP
5843665854991134DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58552058591839930S ribosomal protein S11QuickGO ontologyBLASTP
58594058630836930S ribosomal protein S13QuickGO ontologyBLASTP
5863645877371374preprotein translocase subunit SecYQuickGO ontologyBLASTP
58776058819443550S ribosomal protein L15QuickGO ontologyBLASTP
58818758868449830S ribosomal protein S5QuickGO ontologyBLASTP
58869958907037250S ribosomal protein L18QuickGO ontologyBLASTP
58909258964355250S ribosomal protein L6QuickGO ontologyBLASTP
58967159007240230S ribosomal protein S8QuickGO ontologyBLASTP
59009059063254350S ribosomal protein L5QuickGO ontologyBLASTP
59063459096933650S ribosomal protein L24QuickGO ontologyBLASTP
59098259135036950S ribosomal protein L14QuickGO ontologyBLASTP
59136759161825230S ribosomal protein S17QuickGO ontologyBLASTP
59161159182921950S ribosomal protein L29QuickGO ontologyBLASTP
59183159224741750S ribosomal protein L16QuickGO ontologyBLASTP
59228059295467530S ribosomal protein S3QuickGO ontologyBLASTP
59296459329933650S ribosomal protein L22QuickGO ontologyBLASTP
59331859358426730S ribosomal protein S19QuickGO ontologyBLASTP
59359059444485550S ribosomal protein L2QuickGO ontologyBLASTP
59446859480333650S ribosomal protein L23QuickGO ontologyBLASTP
59481959548766950S ribosomal protein L4QuickGO ontologyBLASTP
59549659616166650S ribosomal protein L3QuickGO ontologyBLASTP
596595597491897hypothetical proteinBLASTP
597657598607951methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
598597599439843UDP-N-acetylglucosamine acyltransferaseQuickGO ontologyBLASTP
5994515999124623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
599909600769861UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6008706024981629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
602562603044483acyl-CoA hydrolaseQuickGO ontologyBLASTP
603180603932753DNA polymerase III subunit epsilonQuickGO ontologyBLASTP
603936604409474putative nucleotide-binding proteinQuickGO ontologyBLASTP
604388605104717hypothetical protein