Pre_GI Gene

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Host: NC_017436 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017436:581986 Chlamydia trachomatis D-LC chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
582188583054867hypothetical proteinBLASTP
5830655840691005Glyceraldehyde 3-phosphate dehydrogenaseQuickGO ontologyBLASTP
58411358453842650S ribosomal protein L17QuickGO ontologyBLASTP
5845475857311185DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
58570158609939930S ribosomal protein S11QuickGO ontologyBLASTP
58612158648936930S ribosomal protein S13QuickGO ontologyBLASTP
5865455879181374Protein translocase subunitQuickGO ontologyBLASTP
58794158837543550S ribosomal protein L15QuickGO ontologyBLASTP
58836858886549830S ribosomal protein S5QuickGO ontologyBLASTP
58888058925137250S ribosomal protein L18QuickGO ontologyBLASTP
58927358982455250S ribosomal protein L6QuickGO ontologyBLASTP
58985259025340230S ribosomal protein S8QuickGO ontologyBLASTP
59027159081354350S ribosomal protein L5QuickGO ontologyBLASTP
59081559115033650S ribosomal protein L24QuickGO ontologyBLASTP
59116359153136950S ribosomal protein L14QuickGO ontologyBLASTP
59154859179925230S ribosomal protein S17QuickGO ontologyBLASTP
59179259203724650S ribosomal protein L29QuickGO ontologyBLASTP
59201259242841750S ribosomal protein L16QuickGO ontologyBLASTP
59246159313567530S ribosomal protein S3QuickGO ontologyBLASTP
59314559348033650S ribosomal protein L22QuickGO ontologyBLASTP
59349959376526730S ribosomal protein S19QuickGO ontologyBLASTP
59377159462585550S ribosomal protein L2QuickGO ontologyBLASTP
59464959498433650S ribosomal protein L23QuickGO ontologyBLASTP
59500059569569650S ribosomal protein L1E L4PQuickGO ontologyBLASTP
59567759634266650S ribosomal protein L3QuickGO ontologyBLASTP
596777597679903hypothetical proteinBLASTP
597839598789951Methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
598779599621843Acyl-acyl-carrier-protein--UDP-N- acetylglucosamine O-acyltransferaseQuickGO ontologyBLASTP
5996336000944623R-hydroxymyristoyl-ACP dehydrataseQuickGO ontologyBLASTP
600091600966876UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP
6010526026801629apolipoprotein N-acyltransferaseQuickGO ontologyBLASTP
602744603226483acyl-CoA hydrolaseQuickGO ontologyBLASTP
603362604114753Exonuclease family proteinQuickGO ontologyBLASTP