Pre_GI: BLASTP Hits

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Query: NC_015571:2002489:2035156 Porphyromonas gingivalis TDC60, complete genome

Start: 2035156, End: 2036586, Length: 1431

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF453e-58226
NC_015571:2002489:2036581203658120381431563Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system, subunit S4e-58225
NC_003228:1732497:1732497173249717338401344Bacteroides fragilis NCTC 9343, complete genomeputative type I restriction enzyme specificity protein1e-45184
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit5e-42172
NC_014655:130636:1415751415751430621488Leadbetterella byssophila DSM 17132 chromosome, complete genomerestriction modification system DNA specificity domain7e-38158
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-37156
NC_014363:1902868:1910148191014819115841437Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-37156
NC_013730:3729626:3747015374701537485771563Spirosoma linguale DSM 74, complete genomerestriction modification system DNA specificity domain protein8e-37155
NC_011899:2165814:2178735217873521804321698Halothermothrix orenii H 168, complete genomerestriction modification system DNA specificity domain protein2e-34147
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain4e-30132
NC_009665:2352528:2352528235252823543781851Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit8e-30132
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein3e-29129
NC_009715:1470419:148190214819021482873972Campylobacter curvus 525.92 chromosome, complete genometype I restriction-modification system S subunit2e-27124
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit3e-27123
NC_007925:4060635:4066717406671740680991383Rhodopseudomonas palustris BisB18, complete genometype I restriction enzyme StySPI specificity protein6e-27122
NC_010995:764567:7715967715967739832388Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, S subunit6e-26119
NC_014166:1424754:1432374143237414335251152Arcobacter nitrofigilis DSM 7299 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-25118
NC_017986:1885613:1908432190843219101171686Pseudomonas putida ND6 chromosome, complete genomerestriction modification system DNA specificity subunit2e-25117
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-24114
NC_016830:5994494:6005173600517360065461374Pseudomonas fluorescens F113 chromosome, complete genomeType I restriction-modification system, specificity subunit S2e-23110
NC_009656:6224221:6241571624157162432141644Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S1e-22108
NC_014408:1340016:1352967135296713542741308Methanothermobacter marburgensis str. Marburg chromosome, completetype I restriction-modification enzyme, subunit S1e-22107
NC_015144:47783:8410884108853311224Weeksella virosa DSM 16922 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-22107
NC_014727:368698:3798813798813812961416Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type i site-specific deoxyribonuclease chain s3e-22107
NC_014315:1396990:1412173141217314136661494Nitrosococcus watsoni C-113 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-22106
NC_014394:3114648:3132320313232031340411722Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction modification system DNA specificity domain4e-22106
NC_007908:1108494:1128342112834211295351194Rhodoferax ferrireducens T118, complete genomerestriction modification system DNA specificity domain3e-22106
NC_015437:767572:7790997790997804301332Selenomonas sputigena ATCC 35185 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-21104
NC_014366:478000:4935854935854947841200Gamma proteobacterium HdN1, complete genomeType I restriction-modification system specificity subunit2e-20100
NC_010468:4059436:4070347407034740721041758Escherichia coli ATCC 8739, complete genomerestriction modification system DNA specificity domain3e-20100
NC_020541:2551539:2562003256200325637091707Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit3e-20100
NC_015873:63487:6196561965634941530Megasphaera elsdenii DSM 20460, complete genomerestriction modification system DNA specificity domain protein1e-1998.2
NC_013406:1217385:1237662123766212388161155Paenibacillus sp. Y412MC10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-1996.3
NC_009328:814530:8393888393888409171530Geobacillus thermodenitrificans NG80-2 chromosome, complete genometype I specificity subunit HsdS5e-1996.3
NC_018528:697553:696817696817697560744Lactobacillus helveticus R0052 chromosome, complete genomerestriction modification system DNA specificity subunit2e-1894
NC_009434:695582:7172977172977187151419Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit2e-1894
NC_009943:940835:9510329510329527651734Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain5e-1892.8
NC_019904:5308998:5313727531372753149651239Echinicola vietnamensis DSM 17526 chromosome, complete genomerestriction endonuclease S subunit2e-1790.5
NC_015161:1556766:1592163159216315933531191Deinococcus proteolyticus MRP chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1790.5
NC_014638:183115:2105542105542117651212Bifidobacterium bifidum PRL2010 chromosome, complete genometype I restriction-modification system specificity determinant3e-1790.1
NC_014306:4376012:4402909440290944046391731Erwinia billingiae Eb661, complete genomeType I restriction-modification system, S subunit4e-1789.7
NC_014216:1197704:1203140120314012045161377Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-1789.4
NC_008702:1:90359035103841350Azoarcus sp. BH72, complete genomeType I site-specific deoxyribonuclease8e-1789
NC_009974:53865:6261262612638681257Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completerestriction modification system DNA specificity subunit7e-1789
NC_012587:128845:1486971486971501871491Rhizobium sp. NGR234, complete genomeputative restriction endonuclease type I, S subunit7e-1789
NC_008639:1573971:1587158158715815888311674Chlorobium phaeobacteroides DSM 266, complete genomerestriction modification system DNA specificity domain7e-1789
NC_016620:781995:7957407957407969781239Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme specificity protein3e-1686.7
NC_019897:3613830:3634225363422536353971173Thermobacillus composti KWC4 chromosome, complete genomerestriction endonuclease S subunit4e-1583.2
NC_014034:1418681:1425744142574414274261683Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIIIP subunit S5e-1582.8
NC_002947:5386489:5396987539698753987171731Pseudomonas putida KT2440, complete genometype I restriction-modification system, S subunit6e-1582.4
NC_004603:370320:3874733874733892241752Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative HsdS polypeptide, part of CfrA family8e-1479
NC_010994:859500:8739068739068751801275Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, specificity subunit8e-1479
NC_004307:2208591:2219603221960322208231221Bifidobacterium longum NCC2705, complete genomeHsdS specificity protein of type I restriction-modification system7e-1479
NC_013959:2449315:2462541246254124638211281Sideroxydans lithotrophicus ES-1 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1377
NC_014965:997344:1006320100632010080921773Vibrio vulnificus MO6-24/O chromosome I, complete sequencetype I restriction-modification system, DNA-methyltransferase subunit M3e-1377
NC_016589:183432:2040932040932054061314Burkholderia sp. YI23 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein3e-1377
NC_004307:2208591:221546622154662216035570Bifidobacterium longum NCC2705, complete genometruncated type I restriction system specificity protein4e-1376.6
NC_012669:549500:5588755588755601011227Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein1e-1275.1
NC_009033:755226:7610247610247624151392Staphylothermus marinus F1, complete genomerestriction modification system DNA specificity domain1e-1275.1
NC_014814:2588628:2629651262965126309191269Mycobacterium sp. Spyr1 chromosome, complete genomerestriction endonuclease S subunit1e-1274.7
NC_018748:1443176:1444217144421714455061290Emticicia oligotrophica DSM 17448 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1274.3
NC_012914:5446366:5451995545199554533651371Paenibacillus sp. JDR-2, complete genomerestriction modification system DNA specificity domain protein2e-1274.3
NC_003902:3430051:3445487344548734467341248Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction enzyme specificity chain-like protein2e-1273.9
NC_010688:1435694:1442200144220014434471248Xanthomonas campestris pv. campestris, complete genometype I site-specific DNA methyltransferase specificity subunit2e-1273.9
NC_007086:1457531:1464058146405814653051248Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction enzyme (specificity chain) homolog2e-1273.9
NC_010682:460523:4806054806054819121308Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system DNA specificity domain4e-1273.2
NC_014762:890914:9015629015629027821221Sulfuricurvum kujiense DSM 16994 chromosome, complete genomerestriction modification system DNA specificity domain4e-1273.2
NC_015761:299386:3115343115343127541221Salmonella bongori NCTC 12419, complete genometype I restriction-modification methylase5e-1272.8
NC_007298:1418500:141851114185111419368858Dechloromonas aromatica RCB, complete genomeRestriction modification system DNA specificity domain7e-1272.4
NC_011283:5011497:5019495501949550208621368Klebsiella pneumoniae 342 chromosome, complete genometype I restriction modification DNA specificity domain protein1e-1172
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1171.6
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity2e-1170.9
NC_013093:1036772:1069664106966410709921329Actinosynnema mirum DSM 43827, complete genomerestriction modification system DNA specificity domain protein4e-1170.1
NC_015676:1530000:1544290154429015455401251Methanosalsum zhilinae DSM 4017 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-1169.7
NC_013889:1740858:1753736175373617549951260Thioalkalivibrio sp. K90mix chromosome, complete genomerestriction modification system DNA specificity domain protein6e-1169.3
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S6e-1169.3
NC_015953:4746983:4757318475731847586491332Streptomyces sp. SirexAA-E chromosome, complete genomeRestriction endonuclease S subunits-like protein8e-1168.9
NC_009049:1934398:1962148196214819635181371Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencerestriction modification system DNA specificity domain1e-1068.2
NC_016593:416661:4224874224874236651179Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-1067.8
NC_015953:3227000:3236026323602632372041179Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1067.8
NC_016610:2077603:2094664209466420960731410Tannerella forsythia ATCC 43037 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein3e-1067
NC_016593:956839:961568961568962326759Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein4e-1066.6
NC_015578:1430112:1445653144565314468701218Treponema primitia ZAS-2 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-1066.2
NC_015557:90503:9750697506988251320Hydrogenobaculum sp. 3684 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0964.7
NC_020411:90538:9754197541988601320Hydrogenobaculum sp. HO, complete genomerestriction modification system DNA specificity domain containing protein1e-0964.7
NC_015587:90539:9754297542988611320Hydrogenobaculum sp. SHO chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0964.7
NC_015563:4911188:4921644492164449229751332Delftia sp. Cs1-4 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0964.3
NC_014206:2807879:2818599281859928200561458Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0963.5
NC_019977:1353332:1361527136152713627771251Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit4e-0963.2
NC_013508:3188978:3232492323249232338171326Edwardsiella tarda EIB202, complete genometype I restriction modification DNA specificity domain protein5e-0962.8
NC_015222:3137167:3144490314449031457521263Nitrosomonas sp. AL212 chromosome, complete genomerestriction modification system DNA specificity domain6e-0962.8
NC_014643:2056280:2064525206452520656281104Rothia dentocariosa ATCC 17931 chromosome, complete genometype I restriction modification enzyme protein S7e-0962.4
NC_012489:209016:2143972143972157341338Gemmatimonas aurantiaca T-27, complete genometype I restriction-modification system restriction subunit7e-0962.4
NC_008054:899441:9123779123779135401164Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit1e-0862
NC_015942:668775:6882126882126894141203Acidithiobacillus ferrivorans SS3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0861.6
NC_011726:3051408:307317230731723073756585Cyanothece sp. PCC 8801, complete genomerestriction modification system DNA specificity domain protein1e-0861.6
NC_013222:817686:836480836480837307828Robiginitalea biformata HTCC2501, complete genometype I restriction system specificity protein1e-0861.6
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit2e-0861.2
NC_011901:625712:6338466338466352221377Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system, S subunit2e-0860.8
NC_015856:1:1045910459117301272Collimonas fungivorans Ter331 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0860.8
NC_011761:1357799:1368452136845213696511200Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetype I restriction-modification system subunit S3e-0860.5
NC_008786:2729635:2739305273930527405851281Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain5e-0859.7
NC_016147:1961000:197630919763091977286978Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeRestriction endonuclease S subunits-like protein7e-0859.3
NC_019942:1270060:1302214130221413034581245Aciduliprofundum sp. MAR08-339, complete genomerestriction endonuclease S subunit6e-0859.3
NC_014002:1061501:1071126107112610723701245Methanohalophilus mahii DSM 5219 chromosome, complete genomerestriction modification system DNA specificity domain protein6e-0859.3
NC_016612:2009927:2027292202729220288781587Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S6e-0859.3
NC_013959:1059004:1067359106735910698062448Sideroxydans lithotrophicus ES-1 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-0859.3
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain7e-0858.9
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-0858.9
NC_018876:2628966:267560526756052676201597Methanolobus psychrophilus R15 chromosome, complete genomerestriction endonuclease S subunit8e-0858.9
NC_011071:1178423:1189714118971411908081095Stenotrophomonas maltophilia R551-3, complete genomerestriction modification system DNA specificity domain9e-0858.9
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit9e-0858.5
NC_013943:2705983:2714857271485727160741218Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0758.2
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS21e-0758.2
NC_015844:3159046:3159046315904631604521407Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, S subunit1e-0758.2
NC_008786:3323167:3357602335760233592511650Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain2e-0757.4
NC_017221:535000:5462305462305474921263Bifidobacterium longum subsp. longum KACC 91563 chromosome,restriction endonuclease S subunit2e-0757.4
NC_015434:4640769:4650705465070546519911287Verrucosispora maris AB-18-032 chromosome, complete genomerestriction modification system DNA specificity subunit2e-0757.4
NC_008346:2579756:2600348260034826015891242Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRestriction endonuclease S subunits-like protein2e-0757.4
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0757.4
NC_009725:692237:7010037010037022291227Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein3e-0757
NC_013235:1218378:1225507122550712267091203Nakamurella multipartita DSM 44233, complete genomerestriction modification system DNA specificity domain protein4e-0756.6
NC_012881:3004784:3009162300916230104091248Desulfovibrio salexigens DSM 2638, complete genomerestriction modification system DNA specificity domain protein4e-0756.6
NC_011149:4677412:4701711470171147028591149Salmonella enterica subsp. enterica serovar Agona str. SL483,type I restriction-modification system, endonuclease S subunit5e-0756.2
NC_011830:4187362:4193726419372641949671242Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein7e-0755.8
NC_016816:1137904:1156994115699411586911698Pantoea ananatis LMG 5342, complete genometype I restriction modification DNA specificity domain protein8e-0755.5
NC_009720:1248866:1263097126309712644491353Xanthobacter autotrophicus Py2, complete genomerestriction modification system DNA specificity subunit9e-0755.5
NC_016002:1048420:1074827107482710761731347Pseudogulbenkiania sp. NH8B, complete genometype I restriction-modification system specificity subunit1e-0655.1
NC_005363:3562205:3576704357670435779571254Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system, S subunit1e-0655.1
NC_017080:3317701:3326137332613733274981362Phycisphaera mikurensis NBRC 102666, complete genometype I restriction-modification system specificity subunit2e-0654.7
NC_009925:647752:6642866642866654341149Acaryochloris marina MBIC11017, complete genometype I restriction-modification enzyme S subunit2e-0654.3
NC_007164:1434305:1473658147365814748811224Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, specificity subunit3e-0653.5
NC_010814:1441327:1458977145897714603201344Geobacter lovleyi SZ, complete genomerestriction modification system DNA specificity domain4e-0653.1
NC_014216:3003347:300606530060653006445381Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity subunit5e-0652.8
NC_013411:284461:2934562934562947451290Geobacillus sp. Y412MC61, complete genomerestriction modification system DNA specificity domain protein7e-0652.4
NC_014915:2427000:2444743244474324460321290Geobacillus sp. Y412MC52 chromosome, complete genomerestriction modification system DNA specificity domain protein7e-0652.4