Pre_GI: BLASTP Hits

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Query: NC_015410:3093465:3147996 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 3147996, End: 3149135, Length: 1140

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008148:792610:8041138041138053991287Rubrobacter xylanophilus DSM 9941, complete genomeSarcosine oxidase2e-40167
NC_007492:2629350:2635450263545026366101161Pseudomonas fluorescens PfO-1, complete genomeSarcosine oxidase2e-37156
NC_003143:2741478:2747130274713027482451116Yersinia pestis CO92, complete genomeputative sarcosine oxidase1e-32140
NC_005810:2508671:2517054251705425181691116Yersinia pestis biovar Microtus str. 91001, complete genomeN-methyltryptophan oxidase1e-32140
NC_008150:2173708:2177647217764721787621116Yersinia pestis Antiqua, complete genomeputative sarcosine oxidase1e-32140
NC_017168:2999514:3014188301418830153031116Yersinia pestis A1122 chromosome, complete genomeN-methyltryptophan oxidase1e-32140
NC_004088:1909880:1923586192358619247011116Yersinia pestis KIM, complete genomesarcosine oxidase-like protein1e-32140
NC_020211:2012480:2038214203821420393291116Serratia marcescens WW4, complete genomeFAD-binding N-methyltryptophan oxidase4e-29129
NC_008009:5139896:5153936515393651550271092Acidobacteria bacterium Ellin345, complete genomeFAD dependent oxidoreductase7e-29128
NC_011887:110618:1196411196411207951155Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete2e-25117
NC_014623:6509000:6511911651191165130321122Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesarcosine oxidase2e-21103
NC_008148:1567703:1577597157759715787811185Rubrobacter xylanophilus DSM 9941, complete genomeSarcosine oxidase2e-20100
NC_020291:5409587:5419225541922554203521128Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycine/D-amino acid oxidase3e-1376.6
NC_016884:2701217:2711476271147627126601185Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeFAD dependent oxidoreductase4e-1376.3
NC_002947:4293252:4303152430315243043001149Pseudomonas putida KT2440, complete genomesarcosine oxidase, putative4e-1376.3
NC_015757:831285:8383518383518395501200Sulfobacillus acidophilus TPY chromosome, complete genomesarcosine oxidase5e-1375.9
NC_014623:723089:7317827317827329931212Stigmatella aurantiaca DW4/3-1 chromosome, complete genomefad dependent oxidoreductase8e-1271.6
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase3e-1066.6
NC_008319:262894:2794732794732806271155Synechococcus sp. CC9311, complete genomeputative sarcosine oxidase4e-0755.8
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase5e-0652.4