Pre_GI: BLASTP Hits

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Query: NC_015224:3820338:3839518 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 3839518, End: 3840099, Length: 582

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:3955284:396122039612203961819600Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,membrane protein3e-95347
NC_010634:3905369:391499039149903915577588Yersinia pseudotuberculosis PB1/+, complete genomeputative transcriptional regulator, CadC8e-65246
NC_006155:3992818:400349940034994004086588Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-64244
NC_009708:692508:708541708541709128588Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-64244
NC_010465:733916:748971748971749558588Yersinia pseudotuberculosis YPIII, complete genomeputative transcriptional regulator, CadC4e-64243
NC_004741:3041294:309354530935453094150606Shigella flexneri 2a str. 2457T, complete genomehypothetical protein6e-32136
NC_004337:3049118:310405631040563104661606Shigella flexneri 2a str. 301, complete genomehypothetical protein6e-32136
NC_017328:3088907:314242331424233143028606Shigella flexneri 2002017 chromosome, complete genomeMembrane protein6e-32136
NC_010102:2721374:273210127321012732865765Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0859.7
NC_017046:366905:385084385084385818735Salmonella enterica subsp. enterica serovar Typhimurium str. 798transmembrane regulator1e-0859.7
NC_006905:401154:430112430112430876765Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein2e-0859.3
NC_006511:2467763:247842124784212479155735Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible transmembrane regulator2e-0859.3
NC_011083:403022:432730432730433464735Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative transmembrane regulator2e-0859.3
NC_011147:2463299:247395724739572474691735Salmonella enterica subsp. enterica serovar Paratyphi A strtransmembrane regulator2e-0859.3
NC_012125:373630:380252380252380986735Salmonella enterica subsp. enterica serovar Paratyphi C straintransmembrane regulator2e-0859.3
NC_003197:367430:385573385573386337765Salmonella typhimurium LT2, complete genomeputative inner membrane protein1e-0859.3
NC_016810:366908:385057385057385821765Salmonella enterica subsp. enterica serovar Typhimurium strtransmembrane regulator1e-0859.3
NC_016856:365665:386264386264387028765Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein1e-0859.3
NC_016857:366908:385057385057385821765Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein1e-0859.3
NC_016863:367404:385553385553386317765Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-0859.3
NC_011294:346915:364877364877365641765Salmonella enterica subsp. enterica serovar Enteritidis strtransmembrane regulator2e-0858.9
NC_011080:383441:390063390063390797735Salmonella enterica subsp. enterica serovar Newport str. SL254,putative transmembrane regulator2e-0858.9
NC_004631:2584244:259491425949142595648735Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible transmembrane regulator2e-0858.9
NC_003198:378844:385465385465386199735Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible transmembrane regulator2e-0858.9
NC_016832:2581145:259181525918152592549735Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transmembrane regulator2e-0858.9
NC_011149:361765:368387368387369121735Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transmembrane regulator2e-0858.5
NC_011094:380428:398373398373399107735Salmonella enterica subsp. enterica serovar Schwarzengrund strtransmembrane regulator3e-0858.5
NC_016612:1840325:185718718571871857753567Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative transcriptional regulatory protein1e-0756.2
NC_011083:403022:435911435911436654744Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative response regulator3e-0755.1
NC_011080:383441:393244393244393987744Salmonella enterica subsp. enterica serovar Newport str. SL254,putative response regulator3e-0755.1
NC_011149:361765:371579371579372322744Salmonella enterica subsp. enterica serovar Agona str. SL483,putative response regulator4e-0754.7
NC_015663:1:210462104621852807Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator6e-0753.9
NC_020064:1962172:198639919863991986998600Serratia marcescens FGI94, complete genomeDNA-binding protein with winged-HTH domain6e-0753.9
NC_004631:2584244:259171125917112592454744Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible transmembrane regulator1e-0653.1
NC_003198:378844:388659388659389402744Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible transmembrane regulator1e-0653.1
NC_016832:2581145:258861225886122589355744Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transmembrane regulator1e-0653.1
NC_012125:373630:383397383397384176780Salmonella enterica subsp. enterica serovar Paratyphi C straintransmembrane regulator1e-0652.8
NC_011147:2463299:247082524708252471508684Salmonella enterica subsp. enterica serovar Paratyphi A strtransmembrane regulator2e-0652.4
NC_006511:2467763:247528924752892475972684Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible transmembrane regulator2e-0652.4
NC_010102:2721374:272890927289092729652744Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0652
NC_011094:380428:401567401567402310744Salmonella enterica subsp. enterica serovar Schwarzengrund strresponse regulator2e-0652
NC_014618:1700784:170658417065841707351768Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator CadC3e-0651.6
NC_016831:2627515:263504826350482635791744Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transmembrane regulator3e-0651.6
NC_011274:376970:386772386772387515744Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transmembrane regulator3e-0651.6
NC_020064:3998715:406168040616804062153474Serratia marcescens FGI94, complete genomehypothetical protein7e-0650.4