Pre_GI: BLASTP Hits

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Query: NC_014614:478578:492992 Clostridium sticklandii, complete genome

Start: 492992, End: 494695, Length: 1704

Host Lineage: Clostridium sticklandii; Clostridium; unclassified Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: This Clostridium (HF strain, ATCC 12662) was initially found associated with Methanococcus vannieli in formate-enriched cultures. After its isolation in pure culture, it was shown that this organism is capable of fermenting amino acids. Biochemical studies have shown that C. sticklandii obtains energy for growth from oxidation-reduction reactions between specific amino acid pairs. Clostridium sticklandii is a Gram-positive bacterium with low (G +C) content that is capable of fermenting amino acids.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009633:1058000:1074544107454410762681725Alkaliphilus metalliredigens QYMF chromosome, complete genomestage II sporulation E family protein3e-67256
NC_020134:2772500:2791407279140727925461140Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative phosphatase1e-28128
NC_014392:2513529:2513529251352925146261098Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeputative PAS/PAC sensor protein9e-25115
NC_013790:85889:1007111007111025821872Methanobrevibacter ruminantium M1 chromosome, complete genomeserine phosphatase5e-22106
NC_012796:3374911:3433254343325434344891236Desulfovibrio magneticus RS-1, complete genomehypothetical protein9e-2099
NC_016830:4639388:4656628465662846578091182Pseudomonas fluorescens F113 chromosome, complete genomeprotein RsbU3e-1790.5
NC_010814:2217153:2238961223896122422093249Geobacter lovleyi SZ, complete genomeputative phytochrome sensor protein6e-1789.7
NC_008536:5421036:5441250544125054424371188Solibacter usitatus Ellin6076, complete genomeresponse regulator receiver modulated serine phosphatase8e-1789
NC_012796:4693500:4710180471018047113341155Desulfovibrio magneticus RS-1, complete genomeresponse regulator receiver protein2e-1687.8
NC_014844:3469848:3485824348582434885982775Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePAS sensor protein2e-1687.8
NC_020209:945000:9484489484489496291182Pseudomonas poae RE*1-1-14, complete genomeputative response regulator2e-1687.8
NC_013939:1688400:1701781170178117049903210Deferribacter desulfuricans SSM1, complete genomeserine phosphatase8e-1685.9
NC_007298:1721425:1739474173947417418822409Dechloromonas aromatica RCB, complete genomePAS2e-1584.3
NC_004129:2201780:2203108220310822042921185Pseudomonas fluorescens Pf-5, complete genomeresponse regulator3e-1584
NC_010410:3166279:317913831791383180106969Acinetobacter baumannii AYE, complete genomeputative two-component response regulator2e-1481.6
NC_010611:679862:684391684391685359969Acinetobacter baumannii ACICU, complete genomeSerine phosphatase RsbU, regulator of sigma subunit2e-1481.6
NC_010501:1868888:1868888186888818701261239Pseudomonas putida W619, complete genomeresponse regulator receiver modulated serine phosphatase4e-1480.1
NC_010337:2339056:2351249235124923524331185Heliobacterium modesticaldum Ice1, complete genomeresponse regulator receiver modulated serine phosphatase7e-1479.3
NC_004605:1092476:1108107110810711093271221Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative two-component response regulator1e-1379
NC_013960:452493:4651284651284671822055Nitrosococcus halophilus Nc4 chromosome, complete genomePAS sensor protein9e-1375.5
NC_008027:3953951:3973312397331239744961185Pseudomonas entomophila L48, complete genomeresponse regulator1e-1275.1
NC_013223:1763631:1767581176758117688101230Desulfohalobium retbaense DSM 5692, complete genomeputative PAS/PAC sensor protein4e-1273.6
NC_007205:60069:7711577115784611347Candidatus Pelagibacter ubique HTCC1062, complete genomeSigma factor sigB regulation protein6e-1273.2
NC_014219:567033:5670335670335680461014Bacillus selenitireducens MLS10 chromosome, complete genomeprotein serine/threonine phosphatase1e-1172
NC_007484:3358000:3369303336930333715672265Nitrosococcus oceani ATCC 19707, complete genomePAS sensor, serine phosphatase RsbU regulator of sigma subunit3e-1170.9
NC_009925:1109770:1125246112524611263731128Acaryochloris marina MBIC11017, complete genometwo-component response regulator, putative3e-1170.5
NC_021177:7870464:7889172788917278902871116Streptomyces fulvissimus DSM 40593, complete genomeMagnesium or manganese-dependent protein phosphatase6e-1169.7
NC_014315:3207684:3219592321959232218682277Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein1e-1068.9
NC_012121:1578190:1595479159547915964801002Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative sigmaB regulation protein RsbU1e-1068.6
NC_016622:170000:1881271881271893501224Azospirillum lipoferum 4B, complete genomeputative two-component response regulator2e-1068.2
NC_010655:1808657:1810066181006618117031638Akkermansia muciniphila ATCC BAA-835, complete genomeputative PAS/PAC sensor protein2e-1068.2
NC_007512:944941:9756209756209775511932Pelodictyon luteolum DSM 273, complete genomeserine phosphatase3e-1067.4
NC_010162:2406976:241723024172302418192963Sorangium cellulosum 'So ce 56', complete genomephosphoserine phosphatase5e-1066.6
NC_007512:1162949:1181383118138311833561974Pelodictyon luteolum DSM 273, complete genomeserine phosphatase8e-1065.9
NC_011983:508287:5207735207735230972325Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein1e-0965.1
NC_010688:673454:6734546734546755142061Xanthomonas campestris pv. campestris, complete genomeadenylate cyclase2e-0964.7
NC_007974:1135863:1142022114202211440672046Ralstonia metallidurans CH34 chromosome 2, complete sequencediguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)2e-0964.7
NC_003155:921494:9359539359539387272775Streptomyces avermitilis MA-4680, complete genomemagnesium or manganese-dependent protein phosphatase2e-0964.3
NC_010475:2188827:2193624219362421956992076Synechococcus sp. PCC 7002, complete genometwo-component response regulator2e-0964.3
NC_016010:637535:6375356375356396432109Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeSerine phosphatase RsbU, regulator of sigma subunit7e-0962.8
NC_014394:2111985:2128742212874221310242283Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase8e-0962.8
NC_017271:4193000:4216781421678142188412061Xanthomonas campestris pv. raphani 756C chromosome, completeIcfG protein9e-0962.4
NC_006582:883922:8843548843548853701017Bacillus clausii KSM-K16, complete genomeindirect positive regulator of sigma-B activity1e-0862
NC_018704:347948:3504003504003514101011Amphibacillus xylanus NBRC 15112, complete genomephosphoserine phosphatase RsbU1e-0862
NC_012559:768939:7871377871377896412505Laribacter hongkongensis HLHK9, complete genomePutative PAS/PAC sensor protein2e-0861.6
NC_018643:754104:7541047541047561042001Alpha proteobacterium HIMB5 chromosome, complete genomeCHASE2 domain-containing protein,Stage II sporulation protein E (SpoIIE)2e-0861.2
NC_007519:791679:7947047947047962121509Desulfovibrio alaskensis G20 chromosome, complete genomeserine phosphatase3e-0860.5
NC_015565:2827444:2832013283201328332181206Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprotein serine/threonine phosphatase3e-0757
NC_014976:2735423:2735423273542327364301008Bacillus subtilis BSn5 chromosome, complete genomeserine phosphatase5e-0756.6
NC_019896:3491000:3518845351884535198521008Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSigma factor sig regulation protein RsbU5e-0756.6
NC_008009:2430509:2437727243772724387521026Acidobacteria bacterium Ellin345, complete genomeserine phosphatase6e-0756.2
NC_006138:1571878:1571878157187815739772100Desulfotalea psychrophila LSv54, complete genomesimilar to ICFG protein8e-0755.8
NC_016047:637778:6377786377786387851008Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completephosphoserine phosphatase RsbU2e-0654.7
NC_016751:1700164:1703150170315017045621413Marinitoga piezophila KA3 chromosome, complete genomeserine phosphatase RsbU, regulator of sigma subunit3e-0653.9
NC_004193:375416:6539466539466549591014Oceanobacillus iheyensis HTE831, complete genomeindirect positive regulator of sigma-B activity3e-0653.9