Pre_GI: BLASTP Hits

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Query: NC_014323:3976351:4030287 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4030287, End: 4031168, Length: 882

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015376:2241000:224701822470182247878861Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, RpiR family2e-77289
NC_009079:1492664:151177715117771512637861Burkholderia mallei NCTC 10247 chromosome I, complete sequencephosphosugar-binding transcriptional regulator, RpiR family6e-77287
NC_014640:6745873:679667267966726797544873Achromobacter xylosoxidans A8 chromosome, complete genomeRpiR family transcriptional regulator8e-34144
NC_010505:5035668:504276550427655043655891Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, RpiR family3e-29129
NC_011745:291422:310012310012310845834Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator7e-28124
NC_008149:1221637:122163712216371222491855Yersinia pestis Nepal516, complete genomehypothetical protein3e-27122
NC_004088:1291754:129175412917541292608855Yersinia pestis KIM, complete genomehypothetical protein3e-27122
NC_003143:2895617:289561728956172896471855Yersinia pestis CO92, complete genomehypothetical protein3e-27122
NC_017154:3094000:311353131135313114385855Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-27122
NC_008800:4389687:438968743896874390520834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-27121
NC_019973:5869500:588133358813335882238906Mesorhizobium australicum WSM2073, complete genometranscriptional regulator4e-24112
NC_014923:5940500:595237359523735953278906Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesugar isomerase (SIS)4e-24112
NC_015675:6493444:650704465070446507949906Mesorhizobium opportunistum WSM2075 chromosome, complete genomeRpiR family transcriptional regulator4e-24112
NC_014323:3976351:402026640202664021225960Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein2e-21103
NC_011958:1031592:106964510696451070505861Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTranscriptional regulator, RpiR family4e-21102
NC_008358:2257787:227156122715612272391831Hyphomonas neptunium ATCC 15444, complete genomeSIS domain protein3e-21102
NC_011985:61003:972699726998153885Agrobacterium radiobacter K84 chromosome 1, complete genometranscriptional regulator protein2e-20100
NC_012724:2443500:244352924435292444449921Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, RpiR family protein3e-1892.8
NC_008254:3980327:399500239950023995925924Mesorhizobium sp. BNC1, complete genometranscriptional regulator, RpiR family4e-1892.4
NC_014657:1193985:119567511956751196538864Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, rpir family2e-1583.2
NC_016630:1385719:139135113913511392217867Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator8e-1271.2
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family2e-1169.7
NC_014410:2329838:234588623458862346728843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, RpiR family1e-1067
NC_013093:3157897:317282731728273173732906Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, RpiR family5e-0962
NC_013124:2063460:206463220646322065471840Acidimicrobium ferrooxidans DSM 10331, complete genometranscriptional regulator, RpiR family6e-0961.6
NC_008010:200796:205845205845206717873Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, RpiR family2e-0860.1
NC_014377:321949:336280336280337122843Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, RpiR family4e-0858.9
NC_015152:272500:274117274117274971855Spirochaeta sp. Buddy chromosome, complete genomeRpiR family transcriptional regulator4e-0858.9
NC_015389:616430:639327639327640196870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family7e-0754.7