Pre_GI: BLASTP Hits

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Query: NC_014169:1909482:1928183 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1928183, End: 1928416, Length: 234

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:909090:9136409136409150701431Clostridium pasteurianum BC1, complete genomedrug resistance transporter, EmrB/QacA subfamily3e-21100
NC_004193:375416:5165975165975180091413Oceanobacillus iheyensis HTE831, complete genomemultidrug resistance protein1e-2098.6
NC_013205:2965110:2981254298125429831611908Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,drug resistance transporter, EmrB/QacA subfamily3e-2097.1
NC_014219:2253023:2257572225757222590051434Bacillus selenitireducens MLS10 chromosome, complete genomedrug resistance transporter, EmrB/QacA subfamily5e-2096.3
NC_015978:352478:3578763578763593541479Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeMFS-type transporter YcnB4e-1993.2
NC_016593:1713000:1714540171454017162521713Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeDrug resistance transporter, EmrB/QacA subfamily8e-1992.4
NC_015759:667505:6675056675056688871383Weissella koreensis KACC 15510 chromosome, complete genomemajor facilitator superfamily permease1e-1892
NC_003909:4333097:4351454435145443532531800Bacillus cereus ATCC 10987, complete genomedrug resistance transporter, EmrB/QacA family3e-1890.5
NC_011772:4487378:4498934449893445007331800Bacillus cereus G9842, complete genomedrug resistance transporter, EmrB/QacA family3e-1890.5
NC_004722:4496000:4513292451329245148331542Bacillus cereus ATCC 14579, complete genomeMultidrug resistance protein B4e-1889.7
NC_006274:4408734:4422730442273044245291800Bacillus cereus E33L, complete genomemultidrug resistance protein B5e-1889.7
NC_012121:1676367:1691270169127016927181449Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein2e-1684.3
NC_005957:1037205:1054508105450810559561449Bacillus thuringiensis serovar konkukian str. 97-27, completepermease, general substrate transporter3e-1477
NC_011773:1050000:1067482106748210689301449Bacillus cereus AH820 chromosome, complete genomeEmrB/QacA family drug resistance transporter5e-1476.6
NC_006274:1040836:1058177105817710596251449Bacillus cereus E33L, complete genomepermease, general substrate transporter5e-1476.3
NC_008600:1042477:1060434106043410618851452Bacillus thuringiensis str. Al Hakam, complete genomepermease, general substrate transporter5e-1476.3
NC_016779:991298:1006992100699210084431452Bacillus cereus F837/76 chromosome, complete genomedrug resistance transporter, EmrB/QacA family5e-1476.3
NC_005945:1008000:1025155102515510266031449Bacillus anthracis str. Sterne, complete genomedrug resistance transporter, EmrB/QacA family5e-1476.3
NC_003997:1007139:1025262102526210267101449Bacillus anthracis str. Ames, complete genomedrug resistance transporter, EmrB/QacA family5e-1476.3
NC_007530:1007140:1025262102526210267101449Bacillus anthracis str. 'Ames Ancestor', complete genomedrug resistance transporter, emrb/qaca family5e-1476.3
NC_012659:1008028:1025162102516210266101449Bacillus anthracis str. A0248, complete genomedrug resistance transporter, EmrB/QacA family5e-1476.3
NC_020302:2677617:2684284268428426857741491Corynebacterium halotolerans YIM 70093 = DSM 44683, completelincomycin-resistance protein7e-1475.9
NC_019897:938921:9480159480159494361422Thermobacillus composti KWC4 chromosome, complete genomeEmrB/QacA subfamily drug resistance transporter9e-1475.5
NC_009524:1796000:1800001180000118014761476Psychrobacter sp. PRwf-1 chromosome, complete genomeEmrB/QacA family drug resistance transporter1e-1375.1
NC_018720:311844:3118443118443133161473Bifidobacterium asteroides PRL2011 chromosome, complete genomeMFS transporter, probably Lincomycin resistance protein, Lincomycin:H+ antiporter, LmrB2e-1271.2
NC_008268:7576365:7589222758922275907151494Rhodococcus sp. RHA1, complete genomemultidrug resistance transporter, MFS superfamily3e-1270.1
NC_009513:1363987:1366627136662713680241398Lactobacillus reuteri F275, complete genomedrug resistance transporter, EmrB/QacA subfamily7e-1269.3
NC_014152:927969:9286339286339302131581Thermincola sp. JR, complete genomedrug resistance transporter, EmrB/QacA subfamily2e-1167.4
NC_016935:4367000:4412608441260844140411434Paenibacillus mucilaginosus 3016 chromosome, complete genomeLmrB2 protein4e-1166.6
NC_015690:4643869:4673542467354246749751434Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLmrB24e-1166.6
NC_010610:861194:8622748622748636621389Lactobacillus fermentum IFO 3956, complete genomemultidrug transport protein5e-1166.6
NC_013385:1064188:1072497107249710740901594Ammonifex degensii KC4, complete genome2e-1064.7
NC_006361:3132000:3145639314563931471231485Nocardia farcinica IFM 10152, complete genomeputative transporter2e-1064.7
NC_015697:321311:326790326790327182393Lactobacillus reuteri SD2112 chromosome, complete genomelincomycin resistance protein LmrB2e-1064.3
NC_016605:50695:5660756607579411335Pediococcus claussenii ATCC BAA-344 chromosome, complete genomemajor facilitator superfamily protein2e-1064.3
NC_016935:1868839:1879927187992718813751449Paenibacillus mucilaginosus 3016 chromosome, complete genomeLmrB protein3e-1063.9
NC_015690:1348691:1359676135967613611241449Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLmrB3e-1063.9
NC_014616:462000:4663974663974680641668Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein3e-1063.5
NC_014656:1161188:1189629118962911912241596Bifidobacterium longum subsp. longum BBMN68 chromosome, completepermease2e-0961.2
NC_017219:508500:5132855132855148801596Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transport protein2e-0961.2
NC_011593:507438:5134925134925150811590Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,EmrB/QacA subfamily drug resistance transporter2e-0961.2
NC_017167:351069:3708963708963724941599Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1EmrB/QacA subfamily drug resistance transporter6e-0959.7
NC_008618:1729739:1754325175432517559531629Bifidobacterium adolescentis ATCC 15703, complete genomewidely conserved hypothetical transport protein5e-0959.7
NC_014169:1909482:193195119319511932745795Bifidobacterium longum subsp. longum JDM301 chromosome, completeMFS family major facilitator transporter2e-0857.4
NC_013203:472679:4916534916534931101458Atopobium parvulum DSM 20469, complete genomedrug resistance transporter, EmrB/QacA subfamily2e-0857.4
NC_008528:1265542:1288010128801012895481539Oenococcus oeni PSU-1, complete genomepermease of the major facilitator superfamily3e-0857.4
NC_016641:4151403:4168360416836041698291470Paenibacillus terrae HPL-003 chromosome, complete genomeErmB/QacA family multidrug efflux protein4e-0857
NC_012815:1603916:1633327163332716350511725Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein4e-0857
NC_012814:1599241:1633609163360916353331725Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein4e-0857
NC_011835:733320:7645377645377662611725Bifidobacterium animalis subsp. lactis AD011 chromosome, completehypothetical protein4e-0857
NC_017214:299637:3308493308493325731725Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeMultidrug resistance protein B4e-0857
NC_017215:1605917:1638243163824316399671725Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Multidrug resistance protein B4e-0857
NC_017216:1603000:1633254163325416349781725Bifidobacterium animalis subsp. lactis BLC1, complete genomeMFS family major facilitator transporter4e-0857
NC_017217:1607679:1638896163889616406201725Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein4e-0857
NC_014727:1485656:1488551148855114897181168Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,1e-0755.5
NC_012814:1856632:186148318614831862073591Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein2e-0754.3
NC_012880:2871480:2881352288135228827341383Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_13e-0753.9
NC_007777:4954306:4954306495430649557571452Frankia sp. CcI3, complete genomeDrug resistance transporter EmrB/QacA subfamily3e-0753.9
NC_012779:2957000:2982504298250429840391536Edwardsiella ictaluri 93-146, complete genomemultidrug resistance protein Y6e-0752.8
NC_008529:1265958:1268744126874412701261383Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completepermease of the major facilitator superfamily2e-0651.2
NC_020302:2677617:2689704268970426916141911Corynebacterium halotolerans YIM 70093 = DSM 44683, completemajor facilitator superfamily permease2e-0650.8
NC_014334:37040:5693556935583081374Lactobacillus casei str. Zhang chromosome, complete genomemajor facilitator superfamily permease5e-0649.7
NC_015589:1468774:1482862148286214844271566Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeEmrB/QacA subfamily drug resistance transporter5e-0649.7