Pre_GI: BLASTP Hits

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Query: NC_014034:3111981:3118048 Rhodobacter capsulatus SB1003 chromosome, complete genome

Start: 3118048, End: 3118797, Length: 750

Host Lineage: Rhodobacter capsulatus; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain is a derivative strain isolated in the laboratory of Barry Marrs from the classical progenitor strain B10. It is rifampicin-resistant, produces GTA, and is capable of growing under high illumination (resistant to photooxidative killing). Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to use photosynthesis and usually can grow under both anaerobic and aerobic conditions. This organism is a facultatively phototrophic purple non-sulfur bacterium and the type species of the Rhodobacter group. The colony's color depends largely on the amount of oxygen present in its environment. While it is able to produce cellular energy in a number of different ways, it can rely on anoxygenic photosynthesis under anaerobic conditions in the presence of light. Some strains produce the Gene Transfer Element (GTA), a pro-phage particle capable of transferring genetic material between strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI7e-22104
CU928145:824367:827354827354828109756Escherichia coli 55989 chromosome, complete genomeRegulatory protein CI from bacteriophage origin2e-1892.8
NC_011751:643976:651596651596652351756Escherichia coli UMN026 chromosome, complete genomeregulatory protein CI from bacteriophage origin2e-1892.8
NC_011748:824367:827354827354828109756Escherichia coli 55989, complete genomeRegulatory protein CI from bacteriophage origin2e-1892.8
NC_011989:2549252:255180625518062552465660Agrobacterium vitis S4 chromosome 1, complete sequencetranscriptional regulator5e-1684.7
NC_011740:2769961:278688227868822787610729Escherichia fergusonii ATCC 35469, complete genomeRegulatory protein CI from bacteriophage origin3e-1582
NC_011415:600375:616589616589617281693Escherichia coli SE11 chromosome, complete genomephage transcriptional regulator4e-1581.6
NC_013941:699286:703945703945704559615Escherichia coli O55:H7 str. CB9615 chromosome, complete genomerepressor protein1e-1480.1
NC_013008:2910567:293015629301562930770615Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage-related repressor protein1e-1480.1
NC_011353:2957962:297528529752852975899615Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerepressor protein1e-1480.1
NC_012559:1888000:189387718938771894665789Laribacter hongkongensis HLHK9, complete genomeTranscriptional regulator2e-1479.3
NC_015578:1038588:105704710570471057670624Treponema primitia ZAS-2 chromosome, complete genomepeptidase, S24 family2e-1376.3
NC_006511:2501500:251687725168772517566690Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional activator-regulatory protein3e-1375.5
NC_011147:2496808:251241325124132513102690Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional activator-regulatory protein3e-1375.5
NC_016860:364981:379270379270379959690Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional activator-regulatory protein3e-1375.5
NC_007954:3887488:389894838989483899637690Shewanella denitrificans OS217, complete genometransciptional regulator4e-1375.1
NC_013716:2764550:276546227654622766157696Citrobacter rodentium ICC168, complete genomeputative phage repressor protein5e-1374.7
NC_020063:2565605:258390425839042584608705Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator6e-1374.7
NC_015577:1392390:140873914087391409362624Treponema azotonutricium ZAS-9 chromosome, complete genometranscriptional regulator8e-1374.3
NC_015062:99969:103850103850104560711Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencephage repressor8e-1373.9
NC_009256:1253384:126083512608351261551717Burkholderia vietnamiensis G4 chromosome 1, complete sequenceputative phage repressor8e-1270.9
NC_015733:1943385:195415219541521954856705Pseudomonas putida S16 chromosome, complete genomeputative phage repressor1e-1170.5
NC_014972:2798670:281793528179352818681747Desulfobulbus propionicus DSM 2032 chromosome, complete genomeputative phage repressor1e-1170.1
NC_017506:3248724:325658932565893257266678Marinobacter adhaerens HP15 chromosome, complete genomephage repressor2e-1169.7
NC_010322:1336231:134720713472071347911705Pseudomonas putida GB-1 chromosome, complete genomeputative phage repressor2e-1169.7
NC_015578:2191000:220757522075752208198624Treponema primitia ZAS-2 chromosome, complete genomepeptidase, S243e-1169.3
NC_009436:2776410:281841528184152818849435Enterobacter sp. 638, complete genomephage repressor3e-1168.9
NC_013282:1804909:181500918150091815710702Cronobacter turicensis, complete genome26 kDa repressor protein3e-1168.9
NC_017060:59500:102616102616103311696Rahnella aquatilis HX2 plasmid PRA1, complete sequencephage repressor protein6e-1167.8
NC_015578:465814:479269479269479895627Treponema primitia ZAS-2 chromosome, complete genomeputative peptidase, S24 family9e-1167.4
NC_015578:3410367:342981934298193430442624Treponema primitia ZAS-2 chromosome, complete genomeputative transcriptional regulator1e-1066.6
NC_007963:1552761:156075215607521561435684Chromohalobacter salexigens DSM 3043, complete genomeputative phage repressor3e-1065.9
NC_009348:4135002:415400441540044154720717Aeromonas salmonicida subsp. salmonicida A449, complete genomeprophage transcriptional regulator8e-1064.3
NC_015388:1020747:102332010233201024096777Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeputative phage repressor8e-1064.3
NC_010501:4379920:438793643879364388715780Pseudomonas putida W619, complete genomeputative phage repressor9e-1063.9
NC_007712:1516589:153299615329961533706711Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-0963.2
NC_002937:1233000:123948412394841240251768Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetranscriptional regulator, Cro/CI family2e-0963.2
NC_013282:1200993:121435412143541214710357Cronobacter turicensis, complete genome26 kDa repressor protein4e-0962
NC_009655:1357486:136895013689501369636687Actinobacillus succinogenes 130Z chromosome, complete genomeputative phage repressor4e-0962
NC_004129:2328491:234971423497142350442729Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family5e-0961.6
NC_014562:1772842:178459717845971785031435Pantoea vagans C9-1 chromosome, complete genome26 kDa repressor protein (Regulatory protein CI)1e-0860.1
NC_016845:1285435:129456012945601294928369Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,regulatory protein CI bacteriophage origin4e-0858.5
NC_010814:294394:306642306642307334693Geobacter lovleyi SZ, complete genomeputative phage repressor5e-0858.2
NC_011979:1683964:169505416950541695683630Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family6e-0858.2
NC_008609:251608:267950267950268657708Pelobacter propionicus DSM 2379, complete genomeputative phage repressor6e-0857.8
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage9e-0857.4
NC_015977:3215770:324403432440343244765732Roseburia hominis A2-183 chromosome, complete genomeLexA repressor2e-0756.6
NC_013361:3287671:329508932950893295796708Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI5e-0755.1
NC_012691:779826:793864793864794634771Tolumonas auensis DSM 9187, complete genomeputative phage repressor2e-0653.1
NC_009778:959982:977343977343978032690Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-0650.8
NC_014006:2626544:264222726422272642889663Sphingobium japonicum UT26S chromosome 1, complete genomeputative phage repressor8e-0650.8