Pre_GI: BLASTP Hits

Some Help

Query: NC_013316:1:47861 Clostridium difficile R20291, complete genome

Start: 47861, End: 48955, Length: 1095

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009633:4563877:4606339460633946074421104Alkaliphilus metalliredigens QYMF chromosome, complete genomePilT domain-containing protein3e-97355
NC_019970:336472:3535113535113546141104Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeintegral membrane protein (PIN domain superfamily)2e-89329
NC_002570:126500:1401361401361412241089Bacillus halodurans C-125, complete genomehypothetical protein1e-86320
NC_020291:166500:1680001680001691001101Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomePilT/Pin/TRAM domain-containing protein1e-85316
NC_008262:2598920:2644741264474126458471107Clostridium perfringens SM101, complete genomePIN/TRAM domain protein1e-84313
NC_017208:64500:1037621037621048651104Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein2e-84312
NC_009617:163466:1663881663881674881101Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePilT domain-containing protein2e-84312
NC_014393:4482896:4526109452610945272001092Clostridium cellulovorans 743B chromosome, complete genomePilT protein domain-containing protein8e-82304
NC_010723:223935:2257042257042267981095Clostridium botulinum E3 str. Alaska E43, complete genomepin/tram domain protein6e-82304
NC_010674:222016:2237852237852248791095Clostridium botulinum B str. Eklund 17B, complete genomepin/tram domain protein6e-82304
NC_018704:81733:1132481132481143571110Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein7e-81300
NC_011899:86800:1099341099341110281095Halothermothrix orenii H 168, complete genomePilT protein domain protein2e-80299
NC_008593:196257:2108032108032118821080Clostridium novyi NT, complete genomeMembrane-associated protein6e-79294
NC_019903:421000:4336704336704348391170Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,integral membrane protein4e-78291
NC_014378:131810:1520641520641531881125Acetohalobium arabaticum DSM 5501 chromosome, complete genomePilT protein domain protein3e-77288
NC_013792:33893:3389333893349811089Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencehypothetical protein9e-77287
NC_010382:4479464:4490259449025944913441086Lysinibacillus sphaericus C3-41, complete genomehypothetical protein6e-76284
NC_007503:2098980:2098980209898021000651086Carboxydothermus hydrogenoformans Z-2901, complete genomePIN/TRAM domain protein7e-76284
NC_015425:198315:2154342154342165491116Clostridium botulinum BKT015925 chromosome, complete genomePIN/TRAM domain-containing protein3e-74279
NC_012673:1600242:1600978160097816020421065Exiguobacterium sp. AT1b, complete genomePilT protein domain protein2e-73276
NC_015275:3594890:3629710362971036307651056Clostridium lentocellum DSM 5427 chromosome, complete genomePilT protein domain protein1e-71270
NC_010999:2450974:2466321246632124674361116Lactobacillus casei, complete genomeIntegral membrane protein, PIN and TRAM domains7e-66251
NC_011297:1296968:130221213022121303021810Dictyoglomus thermophilum H-6-12, complete genomepin/tram domain protein9e-64244
NC_014960:3375807:3400231340023134013131083Anaerolinea thermophila UNI-1, complete genomehypothetical protein6e-64244
NC_016148:951446:9713159713159724631149Thermovirga lienii DSM 17291 chromosome, complete genometwitching motility protein PilT8e-62237
NC_017243:3093393:311148631114863112148663Brachyspira intermedia PWS/A chromosome, complete genomeIntegral membrane protein1e-45184
NC_004461:277291:2891102891102901681059Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein7e-45181
NC_014221:2392150:239910923991092400083975Truepera radiovictrix DSM 17093 chromosome, complete genomePilT protein domain protein7e-41167
NC_007516:774489:8108998108998120561158Synechococcus sp. CC9605, complete genomeNucleotide binding protein, PINc3e-38159
NC_011295:779569:7860367860367870401005Coprothermobacter proteolyticus DSM 5265, complete genomeconserved membrane protein, contains PIN domain2e-29130
NC_015562:1460124:1485732148573214876931962Methanotorris igneus Kol 5 chromosome, complete genomePilT protein domain-containing protein9e-0754.7