Pre_GI: BLASTP Hits

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Query: NC_013199:1407742:1421814 Lactobacillus rhamnosus Lc 705, complete genome

Start: 1421814, End: 1422671, Length: 858

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016826:929259:933722933722934576855Streptococcus infantarius subsp. infantarius CJ18 chromosome,ribosomal biogenesis GTPase2e-81302
NC_012471:1197534:120162112016211202475855Streptococcus equi subsp. equi 4047, complete genomeGTPase protein1e-80299
NC_005945:3636321:365527936552793656169891Bacillus anthracis str. Sterne, complete genomeGTPase family protein5e-75281
NC_007530:3616828:365471136547113655601891Bacillus anthracis str. 'Ames Ancestor', complete genomegtpase family protein5e-75281
NC_003997:3617000:365458436545843655474891Bacillus anthracis str. Ames, complete genomeGTPase family protein5e-75281
NC_012581:559182:583086583086583976891Bacillus anthracis str. CDC 684 chromosome, complete genomeribosomal biogenesis GTPase5e-75281
NC_012659:3617000:365461136546113655501891Bacillus anthracis str. A0248, complete genomeribosomal biogenesis GTPase5e-75281
NC_011658:3603009:364262936426293643519891Bacillus cereus AH187 chromosome, complete genomeribosomal biogenesis GTPase4e-75281
NC_011969:3575988:358659035865903587480891Bacillus cereus Q1 chromosome, complete genomeribosomal biogenesis gtpase3e-75281
NC_014171:3726054:373856537385653739455891Bacillus thuringiensis BMB171 chromosome, complete genomeribosomal biogenesis GTPase1e-74280
NC_014335:3589726:360543836054383606328891Bacillus cereus biovar anthracis str. CI chromosome, completeGTP-binding protein HSR1-related protein9e-75280
NC_011773:3689473:368947336894733690363891Bacillus cereus AH820 chromosome, complete genomeribosomal biogenesis GTPase9e-75280
NC_003909:3606177:362998236299823630872891Bacillus cereus ATCC 10987, complete genomeGTPase family protein9e-75280
NC_005957:3665657:367625736762573677147891Bacillus thuringiensis serovar konkukian str. 97-27, completeconserved hypothetical protein, GTPase family8e-75280
NC_017208:3816753:385469838546983855588891Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribosomal biogenesis GTPase1e-74279
NC_011772:3821917:382502338250233825913891Bacillus cereus G9842, complete genomeGTPase family protein1e-74279
NC_010184:3713359:371335937133593714249891Bacillus weihenstephanensis KBAB4, complete genomeGTP-binding protein HSR1-related2e-74278
NC_010382:1607013:162432916243291625201873Lysinibacillus sphaericus C3-41, complete genomehypothetical protein1e-73276
NC_009848:1542978:155695915569591557807849Bacillus pumilus SAFR-032, complete genomeribosomal biogenesis GTPase2e-72272
UCMB5137:1159520:117585511758551176700846Bacillus atrophaeus UCMB-5137ribosomal biogenesis GTPase6e-72270
NC_014483:1973233:198400119840011984900900Paenibacillus polymyxa E681 chromosome, complete genomePredicted GTPase9e-68256
NC_020291:1437431:145001414500141450880867Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome biogenesis GTPase A3e-61235
NC_009784:1231791:124951312495131250457945Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein2e-59229
NC_009698:2420484:242048424204842421362879Clostridium botulinum A str. Hall chromosome, complete genomeribosomal biogenesis GTPase9e-59227
NC_010334:2090990:211206821120682113006939Shewanella halifaxensis HAW-EB4, complete genomeGTP-binding protein HSR1-related2e-58226
NC_009495:2571732:257611625761162576994879Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeribosomal biogenesis GTPase1e-58226
NC_010520:2635750:263913326391332640011879Clostridium botulinum A3 str. Loch Maree, complete genomeGTP-binding protein1e-58226
NC_020134:2237421:224872622487262249631906Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosome biogenesis GTPase A8e-58224
NC_011744:688000:6901306901306911611032Vibrio splendidus LGP32 chromosome 2, complete genomeputative GTPase5e-57221
NC_014328:1379437:139231213923121393166855Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative GTP-binding protein3e-56218
NC_013216:1219775:122229312222931223144852Desulfotomaculum acetoxidans DSM 771, complete genomeGTP-binding protein HSR1-related4e-56218
NC_018515:3865522:388113738811373881964828Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRas superfamily GTP-binding protein YlqF2e-55216
NC_014654:1529500:153309915330991533956858Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosome biogenesis GTP-binding protein YlqF3e-54212
NC_014624:2668157:266932426693242670154831Eubacterium limosum KIST612 chromosome, complete genomeribosome biogenesis GTP-binding protein YlqF6e-53207
NC_016584:4860360:487638748763874877220834Desulfosporosinus orientis DSM 765 chromosome, complete genomeribosome biogenesis GTP-binding protein YlqF5e-51201
NC_005125:4062025:407109640710964071986891Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-45182
NC_014760:101469:106486106486107346861Mycoplasma bovis PG45 chromosome, complete genomeGTP-binding protein1e-31137
NC_013642:545464:568308568308569096789Thermotoga naphthophila RKU-10, complete genomeribosome biogenesis GTP-binding protein YlqF4e-27121
NC_000853:771746:794605794605795393789Thermotoga maritima MSB8, complete genomehypothetical protein1e-26120
NC_011025:313897:328866328866329699834Mycoplasma arthritidis 158L3-1, complete genomeGTPase protein YlqF4e-22105
NC_003364:402268:421982421982422758777Pyrobaculum aerophilum str. IM2, complete genomeGTP binding protein, conjectural3e-1995.9
NC_009376:1:145421454215327786Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeHSR1-like GTP-binding protein9e-1994.4
NC_016885:2091918:214931221493122150097786Pyrobaculum oguniense TE7 chromosome, complete genomeputative GTPase2e-1892.8
NC_016645:1838405:186941118694111870187777Pyrobaculum sp. 1860 chromosome, complete genomehypothetical protein6e-1788.2
NC_016070:637739:637739637739638536798Thermoproteus tenax Kra 1, complete genomeGTPase2e-1686.7
NC_018876:1061682:106583510658351066608774Methanolobus psychrophilus R15 chromosome, complete genomeGTP-binding protein1e-1480.5
NC_003106:1435295:145359114535911454388798Sulfolobus tokodaii str. 7, complete genomehypothetical GTP-binding protein7e-1478.2
NC_007181:1295956:133573213357321336511780Sulfolobus acidocaldarius DSM 639, complete genomeGTP-binding protein6e-1271.6
NC_002754:491695:510007510007510810804Sulfolobus solfataricus P2, complete genomeGTP binding protein, hypothetical6e-1168.2
NC_007644:1352794:1367103136710313684191317Moorella thermoacetica ATCC 39073, complete genomeSmall GTP-binding protein domain1e-1067.4
NC_014471:1153438:118970111897011190516816Ignisphaera aggregans DSM 17230 chromosome, complete genomeGTP-binding protein HSR1-related1e-1067
NC_012623:1119192:113769611376961138484789Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeGTP-binding protein HSR1-related4e-1065.5
NC_009440:1857589:187739418773941878191798Metallosphaera sedula DSM 5348 chromosome, complete genomeGTP-binding protein YlqF8e-1064.3
NC_005213:202400:318940318940319626687Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-0757
NC_005213:295994:318940318940319626687Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-0757
NC_013525:1871795:1896507189650718978531347Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomesmall GTP-binding protein2e-0756.6
NC_009633:3055413:305883630588363059723888Alkaliphilus metalliredigens QYMF chromosome, complete genomeGTP-binding protein Era2e-0653.5
NC_009840:396319:4097414097414111141374Prochlorococcus marinus str. MIT 9215, complete genomeGTP-binding protein (HSR1-related)2e-0653.1
NC_018697:618832:6188326188326202381407Cycloclasticus sp. P1 chromosome, complete genomeGTP-binding factor2e-0653.1
NC_007577:353755:3681563681563695291374Prochlorococcus marinus str. MIT 9312, complete genomeSmall GTP-binding protein domain2e-0653.1
NC_008817:387408:4029574029574043331377Prochlorococcus marinus str. MIT 9515, complete genomeGTP-binding protein (HSR1-related)2e-0652.8
NC_008816:369074:3834743834743848471374Prochlorococcus marinus str. AS9601, complete genomeGTP-binding protein (HSR1-related)3e-0652.8
NC_014817:332000:3505553505553522071653Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceribosome-associated gtpase enga3e-0652.8
NC_008025:2211813:2211813221181322131381326Deinococcus geothermalis DSM 11300, complete genomeSmall GTP-binding protein domain3e-0652.4
NC_015978:1266196:1294368129436812957651398Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completetRNA modification GTPase mnmE4e-0652.4
NC_007614:2675302:2698751269875127001511401Nitrosospira multiformis ATCC 25196 chromosome 1, completeSmall GTP-binding protein domain6e-0651.6
NC_011661:1175743:1178779117877911800891311Dictyoglomus turgidum DSM 6724, complete genomesmall GTP-binding protein9e-0651.2