Pre_GI: BLASTP Hits

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Query: NC_012943:1769445:1780629 Mycobacterium tuberculosis KZN 1435 chromosome, complete genome

Start: 1780629, End: 1780913, Length: 285

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: M. tuberculosis strain KZN 1435 was isolated from a patient in KwaZulu-Natal, South Africa. This strain is multidrug-resistant (resistant to isoniazid and rifampin). This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. This species is responsible for more morbidity in humans than any other bacterial disease. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. The envelope contains the typical polypeptide layer, the peptidoglycan layer, and free lipids. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. These fatty acid-carbohydrate complexes inhibit phago-lysosome fusion and are often considered to be indicators of virulent strains. The cell envelope also includes adhesins and aggressions, but does not contain any known toxins. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015848:2684275:269140426914042691694291Mycobacterium canettii CIPT 140010059, complete genomeputative esat-6 like protein2e-40163
NC_016768:1769332:178051617805161780800285Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeesat-6 like protein EsxI2e-40163
NC_009525:2635792:264420426442042644488285Mycobacterium tuberculosis H37Ra, complete genomeputative esat-6 like protein2e-40163
NC_016768:1769332:179030617903061790590285Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeesat-6 like protein EsxO5e-38156
NC_012943:1769445:179041917904191790703285Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeesat-6 like protein esxO5e-38156
NC_009525:2635792:263579226357922636076285Mycobacterium tuberculosis H37Ra, complete genomeputative esat-6 like protein EsxO5e-38156
NC_010612:4501414:450710145071014507385285Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxN_43e-37153
NC_010612:4501414:450921445092144509498285Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxN_53e-37153
NC_016948:1074034:107656710765671076851285Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein3e-36150
NC_017904:4742775:475334247533424753626285Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein2e-35147
NC_010612:4400260:440066544006654400949285Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxN_62e-31134
NC_012207:2573562:259575725957572595939183Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative EsaT-6 like protein 67e-25112
NC_011896:1380000:138034013803401380627288Mycobacterium leprae Br4923, complete genomehypothetical protein6e-2095.9
NC_002677:1380000:138030013803001380587288Mycobacterium leprae TN, complete genomehypothetical protein6e-2095.9