Pre_GI: BLASTP Hits

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Query: NC_012917:833721:839217 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 839217, End: 839978, Length: 762

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:3684840:369080836908083691569762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-123442
NC_009436:3367194:337950033795003380231732Enterobacter sp. 638, complete genomehypothetical protein4e-27121
NC_016818:1291665:130313713031371303886750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein6e-25114
NC_004547:3866439:387407138740713874256186Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phage capsid protein (partial)8e-25114
NC_021066:5342127:535991653599165360653738Raoultella ornithinolytica B6, complete genomehypothetical protein1e-24113
NC_016810:2871689:289526428952642896067804Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage capsid protein3e-24112
NC_010102:2862178:286300328630032863740738Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-24111
NC_015061:1251905:126414312641431264892750Rahnella sp. Y9602 chromosome, complete genomehypothetical protein9e-24110
NC_016845:575123:588482588482589219738Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-23109
NC_011147:4460726:446072644607264461463738Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-23109
NC_011740:448000:453384453384454184801Escherichia fergusonii ATCC 35469, complete genomeGlycoprotein 3 (Capsid size determination protein)6e-23107
NC_007613:4217557:422250342225034223237735Shigella boydii Sb227, complete genomehypothetical protein8e-23107
NC_011080:2870428:288343428834342884129696Salmonella enterica subsp. enterica serovar Newport str. SL254,glycoprotein 31e-22107
NC_013361:4959323:496073749607374961471735Escherichia coli O26:H11 str. 11368 chromosome, complete genomecapsid size determining protein1e-22106
NC_010498:4072681:408652440865244087258735Escherichia coli SMS-3-5, complete genomeglycoprotein 3, capsid size determination protein Sid2e-22105
NC_010468:49074:504805048051214735Escherichia coli ATCC 8739, complete genomehypothetical protein3e-22105
NC_016857:2871689:289526428952642895959696Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glycoprotein 35e-22104
NC_010468:1130000:115162311516231152357735Escherichia coli ATCC 8739, complete genomehypothetical protein1e-21103
NC_014121:677799:690064690064690807744Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative phage capsid protein2e-21103
NC_004631:4661000:467245546724554673315861Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative phage capsid protein2e-1892.8
NC_003198:4676536:468956646895664690426861Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage capsid protein2e-1892.8
NC_020211:996497:100840610084061009188783Serratia marcescens WW4, complete genomeNAD-dependent aldehyde dehydrogenase6e-1891.3
NC_006511:4465495:446549544654954466229735Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1789
NC_013508:3188978:324857332485733249376804Edwardsiella tarda EIB202, complete genomeputative phage capsid protein1e-1687
NC_009778:567000:597311597311598021711Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1271.6
NC_013508:3593000:361063436106343610996363Edwardsiella tarda EIB202, complete genomehypothetical protein2e-0756.6
NC_004547:913553:922240922240922566327Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phage capsid protein (partial)2e-0652.8