Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3266883 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3266883, End: 3267203, Length: 321

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:690056:724320724320724661342Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein7e-43172
NC_016612:443398:454889454889455212324Klebsiella oxytoca KCTC 1686 chromosome, complete genometoxin of the YpjF-YfjZ toxin-antitoxin system6e-40162
NC_012759:2633949:266128726612872661616330Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system1e-39161
NC_010473:2839902:286724028672402867569330Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system1e-39161
AC_000091:2747520:277610927761092776438330Escherichia coli W3110 DNA, complete genometoxin of the YpjF-YfjZ toxin-antitoxin system1e-39161
NC_000913:2746886:277547527754752775804330Escherichia coli K12, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system1e-39161
NC_020260:882307:893046893046893372327Cronobacter sakazakii Sp291, complete genomehypothetical protein5e-39159
NC_012912:4167429:418008441800844180398315Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF12191e-38158
NC_015761:299386:323231323231323572342Salmonella bongori NCTC 12419, complete genomeprophage protein2e-38157
NC_012912:1053618:108316310831631083477315Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF12191e-38157
NC_020064:3609844:363530536353053635634330Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1219)1e-37154
NC_016902:4236680:423809342380934238434342Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-37154
CP002516:4236680:423809342380934238434342Escherichia coli KO11, complete genomeprotein of unknown function DUF12192e-37154
NC_020260:603796:618890618890619219330Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-37153
NC_016816:1137904:114860511486051148934330Pantoea ananatis LMG 5342, complete genomeCP4-57 prophage4e-37153
NC_011415:308825:327629327629327994366Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-36151
NC_013592:3263005:327709432770943277447354Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF12193e-36150
NC_013961:441719:467060467060467380321Erwinia amylovora, complete genomeUncharacterized protein ykfI2e-36150
NC_013971:3296272:330392033039203304240321Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-36150
NC_009436:522649:542994542994543314321Enterobacter sp. 638, complete genomehypothetical protein4e-36149
NC_014618:4114004:411930441193044119600297Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-35148
NC_020063:4127161:413165941316594131979321Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF1219)3e-35147
NC_020181:5130513:513197551319755132304330Enterobacter aerogenes EA1509E, complete genomeYpjF toxin protein7e-35145
NC_009832:1946401:194766419476641948032369Serratia proteamaculans 568, complete genomeprotein of unknown function DUF12199e-35145
NC_015224:4386599:440497644049764405344369Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-34144
AP010958:3669500:367234936723493672726378Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-33141
NC_013353:3669500:367234936723493672726378Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-33141
NC_011083:4547825:456511445651144565491378Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-33140
NC_007946:1119000:114037611403761140750375Escherichia coli UTI89, complete genomeunknown protein encoded within prophage CP-933L3e-33140
AP010958:5272863:528996552899655290336372Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-33139
NC_013353:5272863:528996552899655290336372Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-33139
NC_004741:3041294:308794130879413088318378Shigella flexneri 2a str. 2457T, complete genomehypothetical protein5e-33139
NC_004337:3049118:309711430971143097491378Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-33139
NC_017328:3088907:313681931368193137196378Shigella flexneri 2002017 chromosome, complete genomehypothetical protein5e-33139
NC_008253:3161311:317475831747583175135378Escherichia coli 536, complete genomehypothetical protein YeeV5e-33139
NC_011745:3405520:342506434250643425438375Escherichia coli ED1a chromosome, complete genometoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage5e-33139
NC_011745:5114500:511726251172625117636375Escherichia coli ED1a chromosome, complete genometoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage5e-33139
NC_013361:5580741:558212255821225582496375Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-33139
NC_004431:4319152:434005943400594340436378Escherichia coli CFT073, complete genomeHypothetical protein yeeV4e-33139
NC_002655:4653160:465278946527894653163375Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L3e-32137
NC_002695:4584177:458380645838064584180375Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-32137
NC_013941:4470932:447374844737484474122375Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-32137
NC_009801:4882684:488571448857144886088375Escherichia coli E24377A, complete genomehypothetical protein2e-32137
NC_013716:5201097:522029052202905220667378Citrobacter rodentium ICC168, complete genomehypothetical protein2e-32137
NC_008253:4817864:483584248358424836219378Escherichia coli 536, complete genomehypothetical protein6e-32135
NC_007946:4875997:489534448953444895721378Escherichia coli UTI89, complete genomehypothetical protein6e-32135
NC_012967:3769499:379410637941063794471366Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-31134
NC_012947:44512:499664996650331366Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-31134
NC_008253:334467:358839358839359216378Escherichia coli 536, complete genomehypothetical protein YeeV4e-31133
NC_014121:3776902:379336237933623793619258Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative toxin module of toxin-antitoxin system7e-31132
NC_011750:4390000:441324144132414413618378Escherichia coli IAI39 chromosome, complete genometoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage7e-31132
NC_015663:1356982:137870813787081379028321Enterobacter aerogenes KCTC 2190 chromosome, complete genomeCP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system7e-31132
NC_016902:44744:477294772948049321Escherichia coli KO11FL chromosome, complete genomehypothetical protein5e-29126
CP002516:44744:477294772948049321Escherichia coli KO11, complete genomeprotein of unknown function DUF12195e-29126
CP002185:4035502:405802440580244058344321Escherichia coli W, complete genomehypothetical protein5e-29126
NC_015663:549425:562064562064562345282Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-22102
NC_012962:3864000:3870561387056138724111851Photorhabdus asymbiotica, complete genomehypothetical protein1e-0962.4
NC_009832:4482500:449768344976834497955273Serratia proteamaculans 568, complete genomehypothetical protein3e-0960.5
NC_009832:426993:444220444220444483264Serratia proteamaculans 568, complete genomehypothetical protein4e-0857
NC_015567:346500:372857372857373120264Serratia sp. AS9 chromosome, complete genomehypothetical protein5e-0856.6
NC_015566:345084:372671372671372934264Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-0856.6
NC_013892:1503162:151980515198051520101297Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-0856.6
NC_016832:4425330:4439548443954844414971950Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-0753.9
NC_012125:4536383:4550636455063645525851950Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-0753.9
NC_003198:4453457:4467675446767544696241950Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-0753.9
NC_010554:2789722:279840927984092798708300Proteus mirabilis HI4320, complete genomehypothetical protein1e-0651.6
NC_009832:4564752:457852645785264578792267Serratia proteamaculans 568, complete genomehypothetical protein5e-0649.7