Pre_GI: BLASTP Hits

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Query: NC_012917:1923059:1935634 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1935634, End: 1937466, Length: 1833

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:1923059:1931694193169419335021809Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycosyl transferase family 85e-170598
NC_012917:1923059:1933585193358519354321848Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycosyl transferase family 87e-161567
NC_016109:3875617:389617138961713897049879Kitasatospora setae KM-6054, complete genomeputative glycosyltransferase2e-1274.3
NC_008312:1725763:172689217268921727728837Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 89e-1272.4
NC_009952:3596399:3608567360856736095951029Dinoroseobacter shibae DFL 12, complete genomelipopolysaccharide 16e-0963.2
NC_015759:760671:775160775160775990831Weissella koreensis KACC 15510 chromosome, complete genomeputative lipopolysaccharide glycosyltransferase2e-0861.2
NC_011740:4007000:4016505401650540175211017Escherichia fergusonii ATCC 35469, complete genomeUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase2e-0655.1
NC_009801:4108179:411905041190504120045996Escherichia coli E24377A, complete genomelipopolysaccharide 1,2-glucosyltransferase1e-0655.1
NC_007613:3637832:364871236487123649707996Shigella boydii Sb227, complete genomelipopolysaccharide 1,2-glucosyltransferase1e-0655.1
CP002516:88500:960959609597090996Escherichia coli KO11, complete genomeLipopolysaccharide glucosyltransferase I1e-0655.1
NC_010658:3774110:378593637859363786931996Shigella boydii CDC 3083-94, complete genomelipopolysaccharide 1,2-glucosyltransferase1e-0655.1
CP002185:3998112:400898340089834009978996Escherichia coli W, complete genomeUDP-galactose:(glucosyl) LPS a1,2-galactosyltransferase1e-0655.1
NC_016902:88500:960959609597090996Escherichia coli KO11FL chromosome, complete genomeLipopolysaccharide glucosyltransferase I1e-0655.1
NC_004431:4223232:423411242341124235107996Escherichia coli CFT073, complete genomeLipopolysaccharide 1,2-glucosyltransferase5e-0653.5
CU928160:3862935:3874818387481838758341017Escherichia coli IAI1 chromosome, complete genomeUDP-glucose:(Glucosyl) LPS alpha1, 3-glucosyltransferase4e-0653.5
NC_011741:3862935:3874818387481838758341017Escherichia coli IAI1 chromosome, complete genomeUDP-glucose:(glucosyl) LPS alpha1, 3-glucosyltransferase4e-0653.5
NC_010498:4031500:404113540411354042130996Escherichia coli SMS-3-5, complete genomelipopolysaccharide 1,2-glucosyltransferase6e-0653.1
NC_011750:4307166:431803443180344319029996Escherichia coli IAI39 chromosome, complete genomeUDP-galactose:(Glucosyl) LPS alpha1, 2-galactosyltransferase6e-0653.1
NC_011742:3998285:400916540091654010160996Escherichia coli S88 chromosome, complete genomeUDP-galactose:(Glucosyl) LPS alpha1, 2-galactosyltransferase6e-0653.1
NC_007946:4050762:406164240616424062637996Escherichia coli UTI89, complete genomelipopolysaccharide 1,2-glucosyltransferase6e-0653.1
NC_008563:4083558:409443840944384095433996Escherichia coli APEC O1, complete genomelipopolysaccharide 1,2-glucosyltransferase6e-0653.1
NC_008253:3896704:390758439075843908579996Escherichia coli 536, complete genomeUDP-galactose:(glucosyl) LPS alpha1,2-galactosyltransferase WaaT6e-0653.1
NC_013421:4790696:4800671480067148016811011Pectobacterium wasabiae WPP163, complete genomeLipopolysaccharide 3-alpha-galactosyltransferase7e-0652.8
NC_016822:4093000:410063341006334101628996Shigella sonnei 53G, complete genomelipopolysaccharide 1,2-glucosyltransferase7e-0652.8
NC_004547:164000:1772841772841782941011Erwinia carotovora subsp. atroseptica SCRI1043, complete genomelipopolysaccharide 1,3-galactosyltransferase7e-0652.8
NC_009800:3821824:383269538326953833690996Escherichia coli HS, complete genomelipopolysaccharide 1,2-glucosyltransferase9e-0652.4
NC_010468:80000:8663386633876491017Escherichia coli ATCC 8739, complete genomeLipopolysaccharide 3-alpha-galactosyltransferase9e-0652.4
NC_016822:4093000:4099600409960041006161017Shigella sonnei 53G, complete genomelipopolysaccharide 1,3-galactosyltransferase1e-0552.4
NC_007384:3956465:3962740396274039637561017Shigella sonnei Ss046, complete genomeUDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase1e-0552.4