Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:1840172:1861399 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1861399, End: 1862733, Length: 1335

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3300000:3326760332676033279921233Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-144511
NC_011283:4438500:4456389445638944576661278Klebsiella pneumoniae 342 chromosome, complete genomerelaxase/mobilization nuclease domain protein4e-143508
NC_009792:3245368:3278160327816032793921233Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-143507
NC_012125:4716000:4728916472891647301751260Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-136484
NC_006905:4638707:465203846520384652868831Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein2e-112406
NC_010694:1052722:107422510742251075052828Erwinia tasmaniensis, complete genomehypothetical protein7e-99361
NC_010067:191190:2070122070122081691158Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-93343
NC_009792:3665369:3682562368256236837731212Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-90333
NC_016514:3573400:3592118359211835933591242Enterobacter cloacae EcWSU1 chromosome, complete genomerelaxase/Mobilization Nuclease family protein3e-90332
NC_009436:3117661:3138136313813631393441209Enterobacter sp. 638, complete genomerelaxase/mobilization nuclease family protein3e-90332
NC_012880:3421500:3430823343082334319831161Dickeya dadantii Ech703, complete genomeRelaxase/mobilization nuclease family protein2e-88326
CU928160:4570498:4587954458795445891621209Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-88326
NC_011741:4570498:4587954458795445891621209Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-88326
NC_009801:2898426:2924064292406429252781215Escherichia coli E24377A, complete genomerelaxase/mobilization nuclease domain protein3e-88325
NC_011094:2791719:2807975280797528092161242Salmonella enterica subsp. enterica serovar Schwarzengrund strrelaxase/mobilization nuclease domain-containing protein4e-86318
NC_016816:1545354:1568538156853815696291092Pantoea ananatis LMG 5342, complete genomerelaxase/mobilization nuclease domain protein6e-85315
NC_004547:1174650:1193409119340911947041296Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-83310
NC_008800:1090000:1106028110602811072991272Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,repetative plasmid-related protein9e-82304
NC_014562:2563466:2582727258272725837641038Pantoea vagans C9-1 chromosome, complete genomehypothetical protein7e-73275
NC_013971:73037:885268852689119594Erwinia amylovora ATCC 49946 chromosome, complete genomemobilization protein1e-59231
NC_012559:854507:8833798833798847041326Laribacter hongkongensis HLHK9, complete genomeRelaxase/mobilization nuclease topoisomerase/primase fusion protein3e-41169
NC_013222:229190:2398182398182408641047Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-33144
NC_011729:2732163:2751610275161027527881179Cyanothece sp. PCC 7424 chromosome, complete genomerelaxase1e-29130
NC_007973:3065632:308756730875673088193627Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein6e-23108
NC_010547:194500:2072282072282082921065Cyanothece sp. ATCC 51142 chromosome linear, complete sequencehypothetical protein6e-22105
NC_019744:20500:3706737067384521386Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, completerelaxase/mobilization nuclease7e-1789
NC_015571:2002489:202430020243002025226927Porphyromonas gingivalis TDC60, complete genomemobilization protein3e-1583.2
NC_019968:1304450:132760613276061328532927Prevotella dentalis DSM 3688 chromosome 2, complete sequencerelaxase/mobilization nuclease1e-1481.3
NC_009615:2590207:261980826198082620728921Parabacteroides distasonis ATCC 8503 chromosome, complete genomemobilization protein BmgA7e-1479
NC_009615:3904962:393117639311763932096921Parabacteroides distasonis ATCC 8503 chromosome, complete genomemobilization protein BmgA7e-1479
NC_004663:1409462:141524214152421416192951Bacteroides thetaiotaomicron VPI-5482, complete genomemobilization protein BmgA2e-1377
NC_006905:4638707:465160046516004651851252Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein9e-1271.6
NC_016610:726128:742472742472743413942Tannerella forsythia ATCC 43037 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein3e-1170.1
NC_003240:137907:1453411453411467561416Nostoc sp. PCC 7120 plasmid pCC7120beta, complete sequencehypothetical protein1e-1068.2
NC_010729:1014957:102941310294131030354942Porphyromonas gingivalis ATCC 33277, complete genomeputative mobilization protein2e-1067
NC_015164:2473496:249453924945392495468930Bacteroides salanitronis DSM 18170 chromosome, complete genomeRelaxase/mobilization nuclease family protein3e-0963.5
NC_015311:403281:430641430641431561921Prevotella denticola F0289 chromosome, complete genomerelaxase/mobilization nuclease domain-containing protein4e-0859.7
NC_009614:4528418:454814545481454549086942Bacteroides vulgatus ATCC 8482 chromosome, complete genomemobilization protein MocA/BmgA2e-0757.8
NC_015571:2044000:2069579206957920708591281Porphyromonas gingivalis TDC60, complete genomehypothetical protein2e-0757.4
NC_007973:3065632:3082830308283030841551326Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein3e-0756.6
NC_015164:2859000:288532128853212886241921Bacteroides salanitronis DSM 18170 chromosome, complete genomeRelaxase/mobilization nuclease family protein1e-0654.7
NC_016776:5174606:5200698520069852019931296Bacteroides fragilis 638R, complete genomehypothetical protein8e-0652
NC_003228:2010643:2048637204863720499321296Bacteroides fragilis NCTC 9343, complete genomehypothetical protein9e-0652