Pre_GI: BLASTP Hits

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Query: NC_012914:5446366:5451995 Paenibacillus sp. JDR-2, complete genome

Start: 5451995, End: 5453365, Length: 1371

Host Lineage: Paenibacillus; Paenibacillus; Paenibacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Isolation: Sweet gum stem wood buried in surface soil; Temp: Mesophile; Temp: 30 C; Habitat: Host, Wood. Paenibacillus sp. JDR-2 was isolated from sweet gum stem wood buried in surface soil. This organism is able to break down methylglucuronxylan in hemicellulose. Paenibacillus sp. JDR-2 may be useful in the production of alternative fuels from plant biomass.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011206:200000:2135782135782147651188Acidithiobacillus ferrooxidans ATCC 53993, complete genomerestriction modification system DNA specificity domain4e-51202
NC_014206:2807879:2818599281859928200561458Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-49196
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain5e-40165
NC_015844:3159046:3159046315904631604521407Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, S subunit2e-39163
NC_009328:814530:8393888393888409171530Geobacillus thermodenitrificans NG80-2 chromosome, complete genometype I specificity subunit HsdS6e-36152
NC_018012:598724:6157906157906170821293Thiocystis violascens DSM 198 chromosome, complete genomerestriction endonuclease S subunit2e-35150
NC_016803:1646342:1659768165976816613661599Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-29128
NC_018721:3155579:3166677316667731679571281Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit S HsdS4e-28126
NC_013720:5769910:5786880578688057884331554Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity subunit8e-28125
NC_015660:3174424:3182135318213531835531419Geobacillus thermoglucosidasius C56-YS93 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-27124
NC_009715:1470419:1483709148370914852951587Campylobacter curvus 525.92 chromosome, complete genomeputative type I restriction-modification system, S subunit3e-26120
NC_007925:4060635:4066717406671740680991383Rhodopseudomonas palustris BisB18, complete genometype I restriction enzyme StySPI specificity protein5e-26119
NC_015873:63487:6196561965634941530Megasphaera elsdenii DSM 20460, complete genomerestriction modification system DNA specificity domain protein1e-23111
NC_015500:2866027:2878192287819228801321941Treponema brennaborense DSM 12168 chromosome, complete genomeprotein of unknown function DUF454e-22106
NC_016593:956839:961568961568962326759Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-21103
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit5e-21102
NC_014253:142026:1667511667511681991449Methanohalobium evestigatum Z-7303 chromosome, complete genomeDNA methylase-type I restriction-modification system6e-2099
NC_010337:616304:6289866289866306021617Heliobacterium modesticaldum Ice1, complete genometype i restriction modification DNA specificity domain1e-1998.2
NC_016816:1137904:1156994115699411586911698Pantoea ananatis LMG 5342, complete genometype I restriction modification DNA specificity domain protein8e-1995.5
NC_010995:764567:7715967715967739832388Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, S subunit1e-1895.1
NC_012669:1700626:1710630171063017119131284Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein9e-1788.6
NC_011884:3099488:3118941311894131201791239Cyanothece sp. PCC 7425, complete genomerestriction modification system DNA specificity domain protein3e-1687
NC_014762:890914:9015629015629027821221Sulfuricurvum kujiense DSM 16994 chromosome, complete genomerestriction modification system DNA specificity domain3e-1687
NC_014727:368698:3798813798813812961416Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type i site-specific deoxyribonuclease chain s4e-1686.3
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1584.7
NC_012587:128845:1486971486971501871491Rhizobium sp. NGR234, complete genomeputative restriction endonuclease type I, S subunit1e-1584.7
NC_009925:2240871:2242037224203722437581722Acaryochloris marina MBIC11017, complete genometype I restriction-modification system S subunit2e-1584.3
NC_003228:1732497:1732497173249717338401344Bacteroides fragilis NCTC 9343, complete genomeputative type I restriction enzyme specificity protein2e-1584
NC_009715:1470419:148190214819021482873972Campylobacter curvus 525.92 chromosome, complete genometype I restriction-modification system S subunit2e-1584
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-1582.4
NC_009049:1934398:1962148196214819635181371Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencerestriction modification system DNA specificity domain1e-1481.6
NC_015571:2002489:2036581203658120381431563Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system, subunit S2e-1480.5
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein5e-1479.7
NC_013967:2103968:2130371213037121316031233Haloferax volcanii DS2 chromosome, complete genometype I restriction-modification system specificity subunit5e-1479.3
NC_015458:2338437:2362859236285923641781320Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein6e-1479
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein1e-1378.6
NC_014166:1424754:1432374143237414335251152Arcobacter nitrofigilis DSM 7299 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1377.4
NC_009712:1008000:1014213101421310155861374Candidatus Methanoregula boonei 6A8, complete genomerestriction modification system DNA specificity subunit2e-1377.4
NC_013730:3729626:3747015374701537485771563Spirosoma linguale DSM 74, complete genomerestriction modification system DNA specificity domain protein3e-1376.6
NC_009665:2352528:2352528235252823543781851Shewanella baltica OS185 chromosome, complete genomerestriction modification system DNA specificity subunit3e-1376.6
NC_008639:1573971:1587158158715815888311674Chlorobium phaeobacteroides DSM 266, complete genomerestriction modification system DNA specificity domain4e-1376.3
NC_012669:549500:5588755588755601011227Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein6e-1375.9
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-1375.9
NC_018876:1061682:1092892109289210942621371Methanolobus psychrophilus R15 chromosome, complete genomehsdS5e-1375.9
NC_014217:2760898:2785685278568527872051521Starkeya novella DSM 506 chromosome, complete genomeRestriction endonuclease S subunits-like protein5e-1375.9
NC_009434:695582:7172977172977187151419Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit5e-1375.9
NC_015571:2002489:2035156203515620365861431Porphyromonas gingivalis TDC60, complete genometype I restriction-modification system2e-1274.3
NC_004347:4441110:4439626443962644411131488Shewanella oneidensis MR-1, complete genometype I restriction-modification system, S subunit3e-1273.6
NC_016612:2009927:2027292202729220288781587Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S3e-1273.6
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit4e-1273.2
NC_013093:1036772:1069664106966410709921329Actinosynnema mirum DSM 43827, complete genomerestriction modification system DNA specificity domain protein8e-1272
NC_005363:3562205:3576704357670435779571254Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system, S subunit9e-1272
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS21e-1171.2
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR5e-1169.3
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS5e-1169.3
NC_015711:8852850:8861468886146888629851518Myxococcus fulvus HW-1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-1168.9
NC_015587:90539:9754297542988611320Hydrogenobaculum sp. SHO chromosome, complete genomerestriction modification system DNA specificity domain protein6e-1168.9
NC_020411:90538:9754197541988601320Hydrogenobaculum sp. HO, complete genomerestriction modification system DNA specificity domain containing protein6e-1168.9
NC_015557:90503:9750697506988251320Hydrogenobaculum sp. 3684 chromosome, complete genomerestriction modification system DNA specificity domain protein6e-1168.9
NC_014363:1902868:1910148191014819115841437Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein6e-1168.9
NC_014366:478000:4935854935854947841200Gamma proteobacterium HdN1, complete genomeType I restriction-modification system specificity subunit6e-1168.9
NC_015676:1530000:1544290154429015455401251Methanosalsum zhilinae DSM 4017 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1068.6
NC_014363:1902868:1912983191298319145601578Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1068.2
NC_008358:2638245:2693495269349526946401146Hyphomonas neptunium ATCC 15444, complete genometype I restriction-modification system, S subunit2e-1067.8
NC_015633:2801321:2804068280406828058431776Vibrio anguillarum 775 chromosome chromosome I, complete sequencetype I restriction-modification system specificity1e-1067.8
NC_018528:697553:696817696817697560744Lactobacillus helveticus R0052 chromosome, complete genomerestriction modification system DNA specificity subunit2e-1067.4
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant2e-1067.4
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity3e-1066.6
NC_016629:3789554:3799536379953638008641329Desulfovibrio africanus str. Walvis Bay chromosome, completerestriction modification system DNA specificity domain-containing protein5e-1066.2
NC_011884:1029328:1038008103800810397261719Cyanothece sp. PCC 7425, complete genomerestriction modification system DNA specificity domain protein9e-1065.5
NC_007164:1434305:1473658147365814748811224Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, specificity subunit8e-1065.5
NC_014315:1396990:1412173141217314136661494Nitrosococcus watsoni C-113 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-1065.5
NC_014915:2427000:2444743244474324460321290Geobacillus sp. Y412MC52 chromosome, complete genomerestriction modification system DNA specificity domain protein7e-1065.5
NC_013411:284461:2934562934562947451290Geobacillus sp. Y412MC61, complete genomerestriction modification system DNA specificity domain protein7e-1065.5
NC_014814:2588628:2629651262965126309191269Mycobacterium sp. Spyr1 chromosome, complete genomerestriction endonuclease S subunit7e-1065.5
NC_015434:4640769:4650705465070546519911287Verrucosispora maris AB-18-032 chromosome, complete genomerestriction modification system DNA specificity subunit2e-0964.7
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit2e-0964.3
NC_004603:370320:3874733874733892241752Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative HsdS polypeptide, part of CfrA family2e-0964.3
NC_014643:2056280:2064525206452520656281104Rothia dentocariosa ATCC 17931 chromosome, complete genometype I restriction modification enzyme protein S2e-0964.3
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain2e-0964.3
NC_014965:997344:1006320100632010080921773Vibrio vulnificus MO6-24/O chromosome I, complete sequencetype I restriction-modification system, DNA-methyltransferase subunit M2e-0963.9
NC_002947:5386489:5396987539698753987171731Pseudomonas putida KT2440, complete genometype I restriction-modification system, S subunit2e-0963.9
NC_010003:1126800:1142463114246311437521290Petrotoga mobilis SJ95, complete genomerestriction modification system DNA specificity domain3e-0963.5
NC_016610:2077603:2094664209466420960731410Tannerella forsythia ATCC 43037 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein3e-0963.5
NC_012491:743883:7529087529087541431236Brevibacillus brevis NBRC 100599, complete genomeputative type I restriction modification system specificity protein3e-0963.5
NC_018748:1443176:1444217144421714455061290Emticicia oligotrophica DSM 17448 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0963.5
NC_013515:715009:7417177417177431381422Streptobacillus moniliformis DSM 12112, complete genomerestriction modification system DNA specificity domain protein4e-0963.2
NC_011899:2165814:2178735217873521804321698Halothermothrix orenii H 168, complete genomerestriction modification system DNA specificity domain protein4e-0963.2
NC_013799:1:1649316493177731281Hydrogenobacter thermophilus TK-6, complete genomerestriction endonuclease S subunit3e-0963.2
NC_017161:1:1655416554178341281Hydrogenobacter thermophilus TK-6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0963.2
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system5e-0962.8
NC_010995:4338860:4352957435295743541531197Cellvibrio japonicus Ueda107, complete genometype I restriction system specificity protein9e-0962
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein8e-0962
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein8e-0962
NC_010994:859500:8739068739068751801275Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, specificity subunit1e-0861.6
NC_010120:788000:8002548002548014711218Neisseria meningitidis 053442, complete genometype I restriction enzyme1e-0861.2
NC_012968:239476:2505692505692517621194Methylotenera mobilis JLW8, complete genomerestriction modification system DNA specificity domain protein1e-0861.2
NC_014650:1893758:1911301191130119125301230Geobacillus sp. Y4.1MC1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0860.8
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit2e-0860.8
NC_017986:1885613:1908432190843219101171686Pseudomonas putida ND6 chromosome, complete genomerestriction modification system DNA specificity subunit2e-0860.8
NC_009943:940835:9510329510329527651734Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain3e-0860.1
NC_004757:427483:4375654375654389051341Nitrosomonas europaea ATCC 19718, complete genomeRestriction modification system, type I3e-0860.1
NC_015565:287900:2995902995903010021413Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completerestriction modification system DNA specificity domain-containing protein3e-0860.1
NC_012793:1718000:1721130172113017224161287Geobacillus sp. WCH70, complete genomerestriction modification system DNA specificity domain protein4e-0859.7
NC_011761:1357799:1368452136845213696511200Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetype I restriction-modification system subunit S6e-0859.3
NC_020541:2551539:2562003256200325637091707Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit6e-0859.3
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein5e-0859.3
NC_002607:81452:8916089160905871428Halobacterium sp. NRC-1, complete genomeRmeS5e-0859.3
NC_010364:84900:9158891588930151428Halobacterium salinarum R1, complete genometype I site-specific deoxyribonuclease subunit rmeS5e-0859.3
NC_015164:493159:5474975474975487861290Bacteroides salanitronis DSM 18170 chromosome, complete genomerestriction modification system DNA specificity domain7e-0858.9
NC_016631:3917253:3956143395614339576421500Granulicella mallensis MP5ACTX8 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-0858.9
NC_007644:1694879:1707326170732617086541329Moorella thermoacetica ATCC 39073, complete genomeRestriction modification system DNA specificity domain8e-0858.9
NC_009033:755226:7610247610247624151392Staphylothermus marinus F1, complete genomerestriction modification system DNA specificity domain8e-0858.9
NC_008740:443274:4727574727574740761320Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain1e-0758.5
NC_016612:2009927:2018525201852520200031479Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system subunit S1e-0758.2
NC_018876:2151226:2161350216135021625671218Methanolobus psychrophilus R15 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0758.2
NC_011295:1263500:1267893126789312699292037Coprothermobacter proteolyticus DSM 5265, complete genometype I restriction/modification enzyme2e-0757.8
NC_003902:3430051:3445487344548734467341248Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction enzyme specificity chain-like protein2e-0757.8
NC_010688:1435694:1442200144220014434471248Xanthomonas campestris pv. campestris, complete genometype I site-specific DNA methyltransferase specificity subunit2e-0757.8
NC_007086:1457531:1464058146405814653051248Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction enzyme (specificity chain) homolog2e-0757.8
NC_014370:885937:9180299180299193151287Prevotella melaninogenica ATCC 25845 chromosome chromosome I,type I restriction modification DNA specificity domain protein2e-0757.4
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system2e-0757
NC_013161:4093322:4102957410295741043271371Cyanothece sp. PCC 8802, complete genomerestriction modification system DNA specificity domain protein3e-0757
NC_009720:1248866:1263097126309712644491353Xanthobacter autotrophicus Py2, complete genomerestriction modification system DNA specificity subunit4e-0756.6
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit4e-0756.6
NC_016610:2077603:2097765209776520989701206Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein5e-0756.2
NC_009974:53865:6261262612638681257Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completerestriction modification system DNA specificity subunit6e-0755.8
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-0755.8
NC_009656:44500:8547085470868641395Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S7e-0755.8
NC_014220:1162948:1167996116799611692641269Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomerestriction modification system DNA specificity domain protein7e-0755.5
NC_011979:3112911:3123744312374431256781935Geobacter sp. FRC-32, complete genomeRestriction endonuclease S subunit-like protein9e-0755.5
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0655.1
NC_018876:587094:6087896087896100811293Methanolobus psychrophilus R15 chromosome, complete genometype I restriction-modification system, S subunit1e-0655.1
NC_010163:614634:6229006229006241591260Acholeplasma laidlawii PG-8A chromosome, complete genometype I site-specific restriction-modification system, S (specificity) subunit2e-0654.3
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S2e-0654.3
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein2e-0654.3
NC_019904:5308998:531281753128175313734918Echinicola vietnamensis DSM 17526 chromosome, complete genomerestriction endonuclease S subunit2e-0653.9
NC_009943:1499111:1505694150569415097824089Candidatus Desulfococcus oleovorans Hxd3, complete genomeN-6 DNA methylase3e-0653.9
NC_013406:1217385:1237662123766212388161155Paenibacillus sp. Y412MC10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-0652.4
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain6e-0652.4